Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 AC141586.5-201ENST00000624546 2050 ntBASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 HOMER2P1-201ENST00000455653 964 ntBASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 HYMAI.1-201ENST00000620949 238 ntBASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 AC079602.3-201ENST00000623931 403 ntBASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 MYLKP1-201ENST00000509077 1580 ntBASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KHDC1Q4VXA5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 AC092597.1-201ENST00000487352 616 ntBASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
KHDC1Q4VXA5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
KHDC1Q4VXA5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.27■□□□□ 0.51
KHDC1Q4VXA5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.27■□□□□ 0.51
KHDC1Q4VXA5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.27■□□□□ 0.51
KHDC1Q4VXA5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
KHDC1Q4VXA5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
KHDC1Q4VXA5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
KHDC1Q4VXA5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
KHDC1Q4VXA5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 AC012317.2-201ENST00000623305 2251 ntBASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 AC112777.1-201ENST00000540175 1423 ntBASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 AL590326.2-201ENST00000625139 305 ntBASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 AL645608.8-201ENST00000606034 2086 ntBASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KHDC1Q4VXA5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.25■□□□□ 0.51
KHDC1Q4VXA5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.25■□□□□ 0.51
KHDC1Q4VXA5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KHDC1Q4VXA5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms