Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.65■□□□□ 0.9
USH1GQ495M9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.65■□□□□ 0.9
USH1GQ495M9 AC125634.1-201ENST00000438758 1403 ntBASIC20.65■□□□□ 0.9
USH1GQ495M9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USH1GQ495M9 AC009078.2-202ENST00000463353 338 ntBASIC20.65■□□□□ 0.9
USH1GQ495M9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.65■□□□□ 0.9
USH1GQ495M9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.65■□□□□ 0.9
USH1GQ495M9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.65■□□□□ 0.9
USH1GQ495M9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
USH1GQ495M9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USH1GQ495M9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.65■□□□□ 0.9
USH1GQ495M9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USH1GQ495M9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USH1GQ495M9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USH1GQ495M9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USH1GQ495M9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USH1GQ495M9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USH1GQ495M9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.64■□□□□ 0.9
USH1GQ495M9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USH1GQ495M9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USH1GQ495M9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
USH1GQ495M9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
USH1GQ495M9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
USH1GQ495M9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.64■□□□□ 0.9
USH1GQ495M9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.64■□□□□ 0.9
USH1GQ495M9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
USH1GQ495M9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.64■□□□□ 0.9
USH1GQ495M9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USH1GQ495M9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
USH1GQ495M9 KRT8P10-201ENST00000450021 1447 ntBASIC20.64■□□□□ 0.89
USH1GQ495M9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.64■□□□□ 0.89
USH1GQ495M9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.64■□□□□ 0.89
USH1GQ495M9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USH1GQ495M9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USH1GQ495M9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.64■□□□□ 0.89
USH1GQ495M9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USH1GQ495M9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USH1GQ495M9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
USH1GQ495M9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.64■□□□□ 0.89
USH1GQ495M9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USH1GQ495M9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.64■□□□□ 0.89
USH1GQ495M9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.64■□□□□ 0.89
USH1GQ495M9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.64■□□□□ 0.89
USH1GQ495M9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
USH1GQ495M9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.64■□□□□ 0.89
USH1GQ495M9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
USH1GQ495M9 AC104692.2-201ENST00000603054 253 ntBASIC20.64■□□□□ 0.89
USH1GQ495M9 REXO1L6P-202ENST00000619970 1078 ntBASIC20.64■□□□□ 0.89
USH1GQ495M9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USH1GQ495M9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
USH1GQ495M9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
USH1GQ495M9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USH1GQ495M9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USH1GQ495M9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
USH1GQ495M9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
USH1GQ495M9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USH1GQ495M9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USH1GQ495M9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.64■□□□□ 0.89
USH1GQ495M9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.63■□□□□ 0.89
USH1GQ495M9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USH1GQ495M9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USH1GQ495M9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USH1GQ495M9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USH1GQ495M9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USH1GQ495M9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USH1GQ495M9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
USH1GQ495M9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.63■□□□□ 0.89
USH1GQ495M9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USH1GQ495M9 SAPCD2P3-201ENST00000455031 850 ntBASIC20.63■□□□□ 0.89
USH1GQ495M9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.63■□□□□ 0.89
USH1GQ495M9 AF238378.1-201ENST00000526806 358 ntBASIC20.63■□□□□ 0.89
USH1GQ495M9 AC009533.2-201ENST00000543664 586 ntBASIC20.63■□□□□ 0.89
USH1GQ495M9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.63■□□□□ 0.89
USH1GQ495M9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.63■□□□□ 0.89
USH1GQ495M9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USH1GQ495M9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.63■□□□□ 0.89
USH1GQ495M9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
USH1GQ495M9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
USH1GQ495M9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.63■□□□□ 0.89
USH1GQ495M9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USH1GQ495M9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USH1GQ495M9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
USH1GQ495M9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USH1GQ495M9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USH1GQ495M9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USH1GQ495M9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USH1GQ495M9 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.62■□□□□ 0.89
USH1GQ495M9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
USH1GQ495M9 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.62■□□□□ 0.89
USH1GQ495M9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USH1GQ495M9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
USH1GQ495M9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
USH1GQ495M9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.62■□□□□ 0.89
USH1GQ495M9 AC132008.2-207ENST00000454517 770 ntBASIC20.62■□□□□ 0.89
USH1GQ495M9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.62■□□□□ 0.89
USH1GQ495M9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.62■□□□□ 0.89
USH1GQ495M9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
USH1GQ495M9 AL121912.1-201ENST00000603683 238 ntBASIC20.62■□□□□ 0.89
USH1GQ495M9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USH1GQ495M9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms