Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.8■□□□□ 0.76
NFX1Q12986 AC009113.1-201ENST00000570267 2443 ntBASIC19.8■□□□□ 0.76
NFX1Q12986 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.79■□□□□ 0.76
NFX1Q12986 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.79■□□□□ 0.76
NFX1Q12986 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
NFX1Q12986 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NFX1Q12986 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
NFX1Q12986 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
NFX1Q12986 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NFX1Q12986 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.79■□□□□ 0.76
NFX1Q12986 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.79■□□□□ 0.76
NFX1Q12986 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.79■□□□□ 0.76
NFX1Q12986 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.79■□□□□ 0.76
NFX1Q12986 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
NFX1Q12986 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 AC120114.3-201ENST00000611923 658 ntBASIC19.79■□□□□ 0.76
NFX1Q12986 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NFX1Q12986 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NFX1Q12986 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NFX1Q12986 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.79■□□□□ 0.76
NFX1Q12986 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.79■□□□□ 0.76
NFX1Q12986 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.79■□□□□ 0.76
NFX1Q12986 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NFX1Q12986 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFX1Q12986 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.78■□□□□ 0.76
NFX1Q12986 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NFX1Q12986 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NFX1Q12986 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
NFX1Q12986 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NFX1Q12986 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.78■□□□□ 0.76
NFX1Q12986 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NFX1Q12986 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.78■□□□□ 0.76
NFX1Q12986 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.78■□□□□ 0.76
NFX1Q12986 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 AC008608.2-201ENST00000606089 416 ntBASIC19.78■□□□□ 0.76
NFX1Q12986 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 ANO7L1-203ENST00000602586 1720 ntBASIC19.78■□□□□ 0.76
NFX1Q12986 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
NFX1Q12986 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.78■□□□□ 0.76
NFX1Q12986 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFX1Q12986 HCG11-201ENST00000411553 5696 ntBASIC19.78■□□□□ 0.76
NFX1Q12986 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.78■□□□□ 0.76
NFX1Q12986 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFX1Q12986 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.77■□□□□ 0.76
NFX1Q12986 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NFX1Q12986 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NFX1Q12986 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.77■□□□□ 0.76
NFX1Q12986 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFX1Q12986 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NFX1Q12986 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFX1Q12986 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFX1Q12986 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFX1Q12986 AL590627.1-203ENST00000421194 1026 ntBASIC19.77■□□□□ 0.76
NFX1Q12986 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.77■□□□□ 0.76
NFX1Q12986 AP001005.1-201ENST00000571755 1248 ntBASIC19.77■□□□□ 0.76
NFX1Q12986 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NFX1Q12986 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFX1Q12986 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFX1Q12986 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NFX1Q12986 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFX1Q12986 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFX1Q12986 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFX1Q12986 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NFX1Q12986 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFX1Q12986 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NFX1Q12986 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFX1Q12986 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms