Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.11■□□□□ 0.33
RAE1P78406 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.11■□□□□ 0.33
RAE1P78406 AC004263.2-201ENST00000617183 678 ntBASIC17.11■□□□□ 0.33
RAE1P78406 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAE1P78406 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAE1P78406 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAE1P78406 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAE1P78406 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAE1P78406 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.11■□□□□ 0.33
RAE1P78406 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.11■□□□□ 0.33
RAE1P78406 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAE1P78406 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAE1P78406 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAE1P78406 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAE1P78406 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAE1P78406 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.1■□□□□ 0.33
RAE1P78406 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.1■□□□□ 0.33
RAE1P78406 TSPY5P-201ENST00000426936 936 ntBASIC17.1■□□□□ 0.33
RAE1P78406 KRT18P65-201ENST00000439811 1286 ntBASIC17.1■□□□□ 0.33
RAE1P78406 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.1■□□□□ 0.33
RAE1P78406 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.1■□□□□ 0.33
RAE1P78406 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.1■□□□□ 0.33
RAE1P78406 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.1■□□□□ 0.33
RAE1P78406 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.1■□□□□ 0.33
RAE1P78406 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.1■□□□□ 0.33
RAE1P78406 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 AL355312.1-201ENST00000407115 2176 ntBASIC17.1■□□□□ 0.33
RAE1P78406 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAE1P78406 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.1■□□□□ 0.33
RAE1P78406 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAE1P78406 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.1■□□□□ 0.33
RAE1P78406 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAE1P78406 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.09■□□□□ 0.33
RAE1P78406 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAE1P78406 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAE1P78406 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.09■□□□□ 0.33
RAE1P78406 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAE1P78406 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAE1P78406 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAE1P78406 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAE1P78406 RNF152P1-201ENST00000397754 604 ntBASIC17.09■□□□□ 0.33
RAE1P78406 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.09■□□□□ 0.33
RAE1P78406 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.09■□□□□ 0.33
RAE1P78406 LINC01023-201ENST00000606054 436 ntBASIC17.09■□□□□ 0.33
RAE1P78406 HYMAI.1-201ENST00000620949 238 ntBASIC17.09■□□□□ 0.33
RAE1P78406 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.09■□□□□ 0.33
RAE1P78406 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAE1P78406 KRT8P47-201ENST00000604727 1398 ntBASIC17.09■□□□□ 0.33
RAE1P78406 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAE1P78406 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.09■□□□□ 0.33
RAE1P78406 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAE1P78406 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAE1P78406 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAE1P78406 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAE1P78406 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.09■□□□□ 0.33
RAE1P78406 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAE1P78406 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RAE1P78406 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.08■□□□□ 0.33
RAE1P78406 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAE1P78406 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAE1P78406 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAE1P78406 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAE1P78406 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAE1P78406 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RAE1P78406 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.08■□□□□ 0.33
RAE1P78406 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RAE1P78406 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RAE1P78406 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.08■□□□□ 0.32
RAE1P78406 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.08■□□□□ 0.32
RAE1P78406 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RAE1P78406 HBZP1-201ENST00000354915 429 ntBASIC17.08■□□□□ 0.32
RAE1P78406 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAE1P78406 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RAE1P78406 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
RAE1P78406 KRT18P48-201ENST00000434763 852 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms