Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH11P55287 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.55■□□□□ 0.24
CDH11P55287 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.55■□□□□ 0.24
CDH11P55287 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH11P55287 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH11P55287 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH11P55287 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
CDH11P55287 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH11P55287 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CDH11P55287 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.55■□□□□ 0.24
CDH11P55287 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH11P55287 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDH11P55287 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CDH11P55287 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDH11P55287 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDH11P55287 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH11P55287 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDH11P55287 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH11P55287 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
CDH11P55287 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH11P55287 AP000593.1-201ENST00000393668 712 ntBASIC16.54■□□□□ 0.24
CDH11P55287 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.54■□□□□ 0.24
CDH11P55287 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH11P55287 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.54■□□□□ 0.24
CDH11P55287 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.54■□□□□ 0.24
CDH11P55287 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH11P55287 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH11P55287 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH11P55287 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDH11P55287 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH11P55287 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CDH11P55287 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CDH11P55287 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH11P55287 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDH11P55287 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CDH11P55287 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDH11P55287 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDH11P55287 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.53■□□□□ 0.24
CDH11P55287 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CDH11P55287 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.53■□□□□ 0.24
CDH11P55287 CKBP1-201ENST00000565489 1086 ntBASIC16.53■□□□□ 0.24
CDH11P55287 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDH11P55287 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDH11P55287 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH11P55287 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH11P55287 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDH11P55287 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.53■□□□□ 0.24
CDH11P55287 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH11P55287 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CDH11P55287 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CDH11P55287 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH11P55287 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH11P55287 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH11P55287 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH11P55287 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH11P55287 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH11P55287 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms