Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.28■□□□□ 0.68
RAD23BP54727 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAD23BP54727 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAD23BP54727 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RAD23BP54727 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAD23BP54727 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAD23BP54727 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.27■□□□□ 0.68
RAD23BP54727 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAD23BP54727 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RAD23BP54727 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.27■□□□□ 0.68
RAD23BP54727 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.27■□□□□ 0.68
RAD23BP54727 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAD23BP54727 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAD23BP54727 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAD23BP54727 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAD23BP54727 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAD23BP54727 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RAD23BP54727 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.27■□□□□ 0.68
RAD23BP54727 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.27■□□□□ 0.68
RAD23BP54727 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAD23BP54727 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.27■□□□□ 0.68
RAD23BP54727 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.27■□□□□ 0.68
RAD23BP54727 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.27■□□□□ 0.68
RAD23BP54727 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RAD23BP54727 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAD23BP54727 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RAD23BP54727 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.27■□□□□ 0.68
RAD23BP54727 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAD23BP54727 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RAD23BP54727 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAD23BP54727 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAD23BP54727 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAD23BP54727 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAD23BP54727 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAD23BP54727 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RAD23BP54727 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.27■□□□□ 0.67
RAD23BP54727 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.26■□□□□ 0.67
RAD23BP54727 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAD23BP54727 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.26■□□□□ 0.67
RAD23BP54727 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAD23BP54727 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAD23BP54727 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAD23BP54727 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAD23BP54727 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RAD23BP54727 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAD23BP54727 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.26■□□□□ 0.67
RAD23BP54727 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAD23BP54727 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.26■□□□□ 0.67
RAD23BP54727 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.26■□□□□ 0.67
RAD23BP54727 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAD23BP54727 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAD23BP54727 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAD23BP54727 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RAD23BP54727 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAD23BP54727 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.25■□□□□ 0.67
RAD23BP54727 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.25■□□□□ 0.67
RAD23BP54727 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.25■□□□□ 0.67
RAD23BP54727 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RAD23BP54727 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAD23BP54727 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 IER3-202ENST00000376377 1350 ntBASIC19.25■□□□□ 0.67
RAD23BP54727 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RAD23BP54727 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.25■□□□□ 0.67
RAD23BP54727 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.25■□□□□ 0.67
RAD23BP54727 TSPY22P-201ENST00000427496 604 ntBASIC19.25■□□□□ 0.67
RAD23BP54727 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.25■□□□□ 0.67
RAD23BP54727 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.25■□□□□ 0.67
RAD23BP54727 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.25■□□□□ 0.67
RAD23BP54727 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.25■□□□□ 0.67
RAD23BP54727 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.25■□□□□ 0.67
RAD23BP54727 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 AC138028.4-201ENST00000564984 1845 ntBASIC19.25■□□□□ 0.67
RAD23BP54727 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
RAD23BP54727 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RAD23BP54727 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAD23BP54727 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.25■□□□□ 0.67
RAD23BP54727 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.24■□□□□ 0.67
RAD23BP54727 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD23BP54727 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAD23BP54727 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAD23BP54727 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAD23BP54727 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RAD23BP54727 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD23BP54727 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAD23BP54727 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD23BP54727 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms