Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 UNC93B7-201ENST00000509439 705 ntBASIC16.52■□□□□ 0.24
SSR4P51571 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.52■□□□□ 0.24
SSR4P51571 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.52■□□□□ 0.24
SSR4P51571 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.52■□□□□ 0.23
SSR4P51571 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.52■□□□□ 0.23
SSR4P51571 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SSR4P51571 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SSR4P51571 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.52■□□□□ 0.23
SSR4P51571 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SSR4P51571 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.52■□□□□ 0.23
SSR4P51571 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SSR4P51571 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.52■□□□□ 0.23
SSR4P51571 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SSR4P51571 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SSR4P51571 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSR4P51571 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSR4P51571 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSR4P51571 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.51■□□□□ 0.23
SSR4P51571 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SSR4P51571 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
SSR4P51571 AC093677.2-201ENST00000600169 1863 ntBASIC16.51■□□□□ 0.23
SSR4P51571 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.51■□□□□ 0.23
SSR4P51571 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSR4P51571 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.51■□□□□ 0.23
SSR4P51571 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SSR4P51571 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSR4P51571 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.51■□□□□ 0.23
SSR4P51571 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SSR4P51571 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.51■□□□□ 0.23
SSR4P51571 FAAHP1-202ENST00000446499 1238 ntBASIC16.51■□□□□ 0.23
SSR4P51571 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.51■□□□□ 0.23
SSR4P51571 AC009533.2-201ENST00000543664 586 ntBASIC16.51■□□□□ 0.23
SSR4P51571 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.51■□□□□ 0.23
SSR4P51571 AC114341.1-201ENST00000618070 349 ntBASIC16.51■□□□□ 0.23
SSR4P51571 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.51■□□□□ 0.23
SSR4P51571 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSR4P51571 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSR4P51571 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSR4P51571 AL096828.2-201ENST00000567259 1965 ntBASIC16.51■□□□□ 0.23
SSR4P51571 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSR4P51571 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SSR4P51571 AC090164.3-201ENST00000610780 2143 ntBASIC16.51■□□□□ 0.23
SSR4P51571 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSR4P51571 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSR4P51571 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSR4P51571 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSR4P51571 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
SSR4P51571 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.5■□□□□ 0.23
SSR4P51571 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
SSR4P51571 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.5■□□□□ 0.23
SSR4P51571 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SSR4P51571 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.5■□□□□ 0.23
SSR4P51571 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.5■□□□□ 0.23
SSR4P51571 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.5■□□□□ 0.23
SSR4P51571 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.5■□□□□ 0.23
SSR4P51571 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.5■□□□□ 0.23
SSR4P51571 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.5■□□□□ 0.23
SSR4P51571 AL138831.2-201ENST00000606564 490 ntBASIC16.5■□□□□ 0.23
SSR4P51571 AC125634.1-201ENST00000438758 1403 ntBASIC16.5■□□□□ 0.23
SSR4P51571 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.5■□□□□ 0.23
SSR4P51571 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
SSR4P51571 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.5■□□□□ 0.23
SSR4P51571 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSR4P51571 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SSR4P51571 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.49■□□□□ 0.23
SSR4P51571 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
SSR4P51571 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.49■□□□□ 0.23
SSR4P51571 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 TP73-AS1-210ENST00000637775 1455 ntBASIC16.49■□□□□ 0.23
SSR4P51571 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SSR4P51571 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 AC135776.1-201ENST00000319817 2481 ntBASIC16.49■□□□□ 0.23
SSR4P51571 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms