Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC1A1P43005 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC1A1P43005 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SLC1A1P43005 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC1A1P43005 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.89■□□□□ 0.61
SLC1A1P43005 AC141257.4-201ENST00000634557 245 ntBASIC18.89■□□□□ 0.61
SLC1A1P43005 AC136944.6-201ENST00000634818 245 ntBASIC18.89■□□□□ 0.61
SLC1A1P43005 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC1A1P43005 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC1A1P43005 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SLC1A1P43005 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC1A1P43005 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC1A1P43005 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC1A1P43005 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SLC1A1P43005 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A1P43005 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A1P43005 AC100803.2-201ENST00000562459 1963 ntBASIC18.88■□□□□ 0.61
SLC1A1P43005 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A1P43005 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A1P43005 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A1P43005 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC1A1P43005 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A1P43005 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A1P43005 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A1P43005 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
SLC1A1P43005 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC1A1P43005 AC034232.1-201ENST00000506026 1064 ntBASIC18.88■□□□□ 0.61
SLC1A1P43005 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC1A1P43005 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC1A1P43005 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC1A1P43005 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A1P43005 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A1P43005 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A1P43005 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC1A1P43005 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
SLC1A1P43005 SIRPAP1-201ENST00000448467 1770 ntBASIC18.88■□□□□ 0.61
SLC1A1P43005 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A1P43005 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A1P43005 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A1P43005 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.88■□□□□ 0.61
SLC1A1P43005 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC1A1P43005 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC1A1P43005 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC1A1P43005 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SLC1A1P43005 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SLC1A1P43005 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SLC1A1P43005 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC1A1P43005 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC1A1P43005 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC1A1P43005 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC1A1P43005 KRT89P-201ENST00000620027 1478 ntBASIC18.87■□□□□ 0.61
SLC1A1P43005 AL138966.2-201ENST00000621997 464 ntBASIC18.87■□□□□ 0.61
SLC1A1P43005 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
SLC1A1P43005 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SLC1A1P43005 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A1P43005 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
SLC1A1P43005 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC1A1P43005 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC1A1P43005 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A1P43005 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC1A1P43005 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SLC1A1P43005 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A1P43005 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A1P43005 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A1P43005 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC1A1P43005 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A1P43005 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A1P43005 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A1P43005 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC1A1P43005 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.86■□□□□ 0.61
SLC1A1P43005 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.86■□□□□ 0.61
SLC1A1P43005 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC1A1P43005 AC116407.2-201ENST00000613639 860 ntBASIC18.86■□□□□ 0.61
SLC1A1P43005 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.86■□□□□ 0.61
SLC1A1P43005 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SLC1A1P43005 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A1P43005 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms