Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.83■□□□□ 0.6
MTHFRP42898 AC027796.2-201ENST00000575326 344 ntBASIC18.83■□□□□ 0.6
MTHFRP42898 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.83■□□□□ 0.6
MTHFRP42898 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MTHFRP42898 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
MTHFRP42898 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MTHFRP42898 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.83■□□□□ 0.6
MTHFRP42898 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.83■□□□□ 0.6
MTHFRP42898 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MTHFRP42898 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MTHFRP42898 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MTHFRP42898 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MTHFRP42898 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
MTHFRP42898 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 AC093484.2-201ENST00000580996 2166 ntBASIC18.82■□□□□ 0.6
MTHFRP42898 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.82■□□□□ 0.6
MTHFRP42898 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.82■□□□□ 0.6
MTHFRP42898 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.82■□□□□ 0.6
MTHFRP42898 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MTHFRP42898 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MTHFRP42898 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.82■□□□□ 0.6
MTHFRP42898 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.82■□□□□ 0.6
MTHFRP42898 KRT18P65-201ENST00000439811 1286 ntBASIC18.82■□□□□ 0.6
MTHFRP42898 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.82■□□□□ 0.6
MTHFRP42898 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.82■□□□□ 0.6
MTHFRP42898 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.82■□□□□ 0.6
MTHFRP42898 AC002347.1-201ENST00000569543 541 ntBASIC18.82■□□□□ 0.6
MTHFRP42898 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 NKAPP1-205ENST00000585790 367 ntBASIC18.82■□□□□ 0.6
MTHFRP42898 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MTHFRP42898 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
MTHFRP42898 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MTHFRP42898 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MTHFRP42898 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.81■□□□□ 0.6
MTHFRP42898 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
MTHFRP42898 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
MTHFRP42898 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.81■□□□□ 0.6
MTHFRP42898 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.81■□□□□ 0.6
MTHFRP42898 AC134684.3-201ENST00000641758 218 ntBASIC18.81■□□□□ 0.6
MTHFRP42898 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
MTHFRP42898 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
MTHFRP42898 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MTHFRP42898 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.81■□□□□ 0.6
MTHFRP42898 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MTHFRP42898 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MTHFRP42898 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTHFRP42898 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
MTHFRP42898 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
MTHFRP42898 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.8■□□□□ 0.6
MTHFRP42898 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MTHFRP42898 SDHAP2-201ENST00000455183 2001 ntBASIC18.8■□□□□ 0.6
MTHFRP42898 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MTHFRP42898 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTHFRP42898 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.8■□□□□ 0.6
MTHFRP42898 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTHFRP42898 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.8■□□□□ 0.6
MTHFRP42898 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.8■□□□□ 0.6
MTHFRP42898 LAGE3P1-201ENST00000425356 484 ntBASIC18.8■□□□□ 0.6
MTHFRP42898 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.8■□□□□ 0.6
MTHFRP42898 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MTHFRP42898 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MTHFRP42898 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.8■□□□□ 0.6
MTHFRP42898 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.8■□□□□ 0.6
MTHFRP42898 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.8■□□□□ 0.6
MTHFRP42898 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTHFRP42898 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.8■□□□□ 0.6
MTHFRP42898 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MTHFRP42898 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTHFRP42898 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTHFRP42898 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms