Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCL3P10147 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.39■□□□□ 0.21
CCL3P10147 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL3P10147 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCL3P10147 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.39■□□□□ 0.21
CCL3P10147 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL3P10147 POM121L3P-201ENST00000419331 1163 ntBASIC16.39■□□□□ 0.21
CCL3P10147 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.39■□□□□ 0.21
CCL3P10147 KRT16P4-201ENST00000453883 522 ntBASIC16.39■□□□□ 0.21
CCL3P10147 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.39■□□□□ 0.21
CCL3P10147 EMBP1-201ENST00000458200 901 ntBASIC16.39■□□□□ 0.21
CCL3P10147 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.39■□□□□ 0.21
CCL3P10147 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.39■□□□□ 0.21
CCL3P10147 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.39■□□□□ 0.21
CCL3P10147 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.39■□□□□ 0.21
CCL3P10147 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.39■□□□□ 0.21
CCL3P10147 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.39■□□□□ 0.21
CCL3P10147 AC114341.1-201ENST00000618070 349 ntBASIC16.39■□□□□ 0.21
CCL3P10147 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.39■□□□□ 0.21
CCL3P10147 TP73-AS1-210ENST00000637775 1455 ntBASIC16.39■□□□□ 0.21
CCL3P10147 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL3P10147 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.39■□□□□ 0.21
CCL3P10147 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CCL3P10147 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CCL3P10147 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CCL3P10147 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.39■□□□□ 0.21
CCL3P10147 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.39■□□□□ 0.21
CCL3P10147 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CCL3P10147 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL3P10147 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CCL3P10147 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL3P10147 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL3P10147 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CCL3P10147 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CCL3P10147 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CCL3P10147 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CCL3P10147 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL3P10147 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CCL3P10147 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL3P10147 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.38■□□□□ 0.21
CCL3P10147 AC004870.1-201ENST00000315132 882 ntBASIC16.38■□□□□ 0.21
CCL3P10147 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL3P10147 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL3P10147 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.38■□□□□ 0.21
CCL3P10147 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.38■□□□□ 0.21
CCL3P10147 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.38■□□□□ 0.21
CCL3P10147 DUTP2-201ENST00000519164 463 ntBASIC16.38■□□□□ 0.21
CCL3P10147 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.38■□□□□ 0.21
CCL3P10147 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.38■□□□□ 0.21
CCL3P10147 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.38■□□□□ 0.21
CCL3P10147 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CCL3P10147 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL3P10147 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CCL3P10147 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.38■□□□□ 0.21
CCL3P10147 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL3P10147 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.38■□□□□ 0.21
CCL3P10147 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL3P10147 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL3P10147 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL3P10147 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CCL3P10147 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CCL3P10147 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL3P10147 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CCL3P10147 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CCL3P10147 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CCL3P10147 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL3P10147 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.37■□□□□ 0.21
CCL3P10147 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.37■□□□□ 0.21
CCL3P10147 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL3P10147 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL3P10147 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL3P10147 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.37■□□□□ 0.21
CCL3P10147 RCN1P2-201ENST00000398357 915 ntBASIC16.37■□□□□ 0.21
CCL3P10147 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL3P10147 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL3P10147 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL3P10147 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL3P10147 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
CCL3P10147 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.37■□□□□ 0.21
CCL3P10147 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL3P10147 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.37■□□□□ 0.21
CCL3P10147 AC009533.2-201ENST00000543664 586 ntBASIC16.37■□□□□ 0.21
CCL3P10147 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL3P10147 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms