Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 AC012317.2-201ENST00000623305 2251 ntBASIC13.46□□□□□ -0.25
SMIM17P0DL12 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 UNC93B4-201ENST00000505679 747 ntBASIC13.46□□□□□ -0.25
SMIM17P0DL12 PRSS44-201ENST00000515154 1146 ntBASIC13.46□□□□□ -0.25
SMIM17P0DL12 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 AC092437.1-201ENST00000624794 1048 ntBASIC13.46□□□□□ -0.25
SMIM17P0DL12 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM17P0DL12 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM17P0DL12 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM17P0DL12 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM17P0DL12 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM17P0DL12 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM17P0DL12 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
SMIM17P0DL12 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM17P0DL12 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM17P0DL12 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM17P0DL12 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
SMIM17P0DL12 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM17P0DL12 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
SMIM17P0DL12 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM17P0DL12 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM17P0DL12 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
SMIM17P0DL12 AC138028.4-201ENST00000564984 1845 ntBASIC13.46□□□□□ -0.26
SMIM17P0DL12 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM17P0DL12 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM17P0DL12 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM17P0DL12 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM17P0DL12 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM17P0DL12 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM17P0DL12 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM17P0DL12 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM17P0DL12 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 KRT8P32-201ENST00000512863 1461 ntBASIC13.45□□□□□ -0.26
SMIM17P0DL12 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM17P0DL12 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM17P0DL12 SLC25A6P5-201ENST00000435663 894 ntBASIC13.45□□□□□ -0.26
SMIM17P0DL12 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM17P0DL12 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM17P0DL12 KRT8P45-201ENST00000414328 1447 ntBASIC13.45□□□□□ -0.26
SMIM17P0DL12 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM17P0DL12 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM17P0DL12 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SMIM17P0DL12 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMIM17P0DL12 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms