Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 NEK4P2-201ENST00000580004 1012 ntBASIC19.53■□□□□ 0.72
CCDC172P0C7W6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC172P0C7W6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 AL024508.2-201ENST00000607749 1894 ntBASIC19.52■□□□□ 0.72
CCDC172P0C7W6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 KRT18P55-202ENST00000578578 1546 ntBASIC19.52■□□□□ 0.72
CCDC172P0C7W6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 HMGA1P5-201ENST00000412453 271 ntBASIC19.52■□□□□ 0.72
CCDC172P0C7W6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 AC092865.7-201ENST00000641832 219 ntBASIC19.52■□□□□ 0.72
CCDC172P0C7W6 AC124067.4-201ENST00000519691 2379 ntBASIC19.52■□□□□ 0.72
CCDC172P0C7W6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC172P0C7W6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC172P0C7W6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CCDC172P0C7W6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.71
CCDC172P0C7W6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC172P0C7W6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC172P0C7W6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
CCDC172P0C7W6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC172P0C7W6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC172P0C7W6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC172P0C7W6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 AC046158.3-201ENST00000624947 2558 ntBASIC19.5■□□□□ 0.71
CCDC172P0C7W6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 AC010947.1-201ENST00000623454 693 ntBASIC19.5■□□□□ 0.71
CCDC172P0C7W6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC172P0C7W6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms