Protein–RNA interactions for Protein: P09874

PARP1, Poly [ADP-ribose] polymerase 1, humanhuman

Known RBP Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1P09874 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.92■□□□□ 0.94
PARP1P09874 NSUN5P1-202ENST00000421140 1535 ntBASIC20.92■□□□□ 0.94
PARP1P09874 NSUN5P2-203ENST00000457352 1529 ntBASIC20.92■□□□□ 0.94
PARP1P09874 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.92■□□□□ 0.94
PARP1P09874 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
PARP1P09874 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PARP1P09874 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PARP1P09874 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.91■□□□□ 0.94
PARP1P09874 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
PARP1P09874 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.91■□□□□ 0.94
PARP1P09874 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
PARP1P09874 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.91■□□□□ 0.94
PARP1P09874 REXO1L9P-201ENST00000604264 2108 ntBASIC20.91■□□□□ 0.94
PARP1P09874 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PARP1P09874 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
PARP1P09874 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PARP1P09874 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PARP1P09874 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PARP1P09874 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.9■□□□□ 0.94
PARP1P09874 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PARP1P09874 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.9■□□□□ 0.94
PARP1P09874 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PARP1P09874 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PARP1P09874 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PARP1P09874 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PARP1P09874 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.9■□□□□ 0.94
PARP1P09874 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PARP1P09874 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PARP1P09874 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.9■□□□□ 0.94
PARP1P09874 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PARP1P09874 AC007613.1-201ENST00000572811 2597 ntBASIC20.9■□□□□ 0.94
PARP1P09874 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PARP1P09874 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PARP1P09874 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.9■□□□□ 0.94
PARP1P09874 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PARP1P09874 MINOS1P3-201ENST00000457048 203 ntBASIC20.9■□□□□ 0.94
PARP1P09874 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
PARP1P09874 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.9■□□□□ 0.94
PARP1P09874 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.9■□□□□ 0.94
PARP1P09874 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.9■□□□□ 0.94
PARP1P09874 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.9■□□□□ 0.94
PARP1P09874 AC099336.1-202ENST00000602961 463 ntBASIC20.9■□□□□ 0.94
PARP1P09874 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PARP1P09874 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PARP1P09874 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PARP1P09874 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PARP1P09874 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PARP1P09874 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PARP1P09874 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
PARP1P09874 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PARP1P09874 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PARP1P09874 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PARP1P09874 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PARP1P09874 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
PARP1P09874 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PARP1P09874 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PARP1P09874 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PARP1P09874 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PARP1P09874 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PARP1P09874 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PARP1P09874 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
PARP1P09874 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PARP1P09874 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.89■□□□□ 0.93
PARP1P09874 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PARP1P09874 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.89■□□□□ 0.93
PARP1P09874 FOSL1P1-201ENST00000511041 816 ntBASIC20.89■□□□□ 0.93
PARP1P09874 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.89■□□□□ 0.93
PARP1P09874 KRT126P-201ENST00000549467 1181 ntBASIC20.89■□□□□ 0.93
PARP1P09874 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.89■□□□□ 0.93
PARP1P09874 AC005336.2-201ENST00000593183 939 ntBASIC20.89■□□□□ 0.93
PARP1P09874 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PARP1P09874 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.89■□□□□ 0.93
PARP1P09874 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.89■□□□□ 0.93
PARP1P09874 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.89■□□□□ 0.93
PARP1P09874 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
PARP1P09874 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PARP1P09874 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PARP1P09874 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PARP1P09874 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms