Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 TSPY21P-201ENST00000433481 731 ntBASIC14.01□□□□□ -0.17
CXCL1P09341 AC093787.1-201ENST00000450396 207 ntBASIC14.01□□□□□ -0.17
CXCL1P09341 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.01□□□□□ -0.17
CXCL1P09341 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCL1P09341 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 KRT18P16-201ENST00000510337 1294 ntBASIC14.01□□□□□ -0.17
CXCL1P09341 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.01□□□□□ -0.17
CXCL1P09341 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCL1P09341 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCL1P09341 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CXCL1P09341 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CXCL1P09341 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CXCL1P09341 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCL1P09341 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCL1P09341 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CXCL1P09341 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CXCL1P09341 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.01□□□□□ -0.17
CXCL1P09341 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CXCL1P09341 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 LINC02228-204ENST00000642115 2962 ntBASIC14.01□□□□□ -0.17
CXCL1P09341 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL1P09341 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14□□□□□ -0.17
CXCL1P09341 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CXCL1P09341 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL1P09341 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CXCL1P09341 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL1P09341 AC105917.1-201ENST00000506637 2539 ntBASIC14□□□□□ -0.17
CXCL1P09341 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL1P09341 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL1P09341 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL1P09341 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14□□□□□ -0.17
CXCL1P09341 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL1P09341 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
CXCL1P09341 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL1P09341 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14□□□□□ -0.17
CXCL1P09341 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CXCL1P09341 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14□□□□□ -0.17
CXCL1P09341 GXYLT1P2-201ENST00000433312 1230 ntBASIC14□□□□□ -0.17
CXCL1P09341 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14□□□□□ -0.17
CXCL1P09341 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14□□□□□ -0.17
CXCL1P09341 AC133552.2-202ENST00000575694 574 ntBASIC14□□□□□ -0.17
CXCL1P09341 MIR6821-201ENST00000617625 74 ntBASIC14□□□□□ -0.17
CXCL1P09341 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14□□□□□ -0.17
CXCL1P09341 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL1P09341 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14□□□□□ -0.17
CXCL1P09341 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14□□□□□ -0.17
CXCL1P09341 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL1P09341 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CXCL1P09341 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL1P09341 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL1P09341 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CXCL1P09341 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14□□□□□ -0.17
CXCL1P09341 AL096828.2-201ENST00000567259 1965 ntBASIC14□□□□□ -0.17
CXCL1P09341 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14□□□□□ -0.17
CXCL1P09341 MTMR9LP-203ENST00000426597 1545 ntBASIC14□□□□□ -0.17
CXCL1P09341 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CXCL1P09341 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCL1P09341 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCL1P09341 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCL1P09341 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCL1P09341 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CXCL1P09341 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
CXCL1P09341 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCL1P09341 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.99□□□□□ -0.17
CXCL1P09341 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.99□□□□□ -0.17
CXCL1P09341 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
CXCL1P09341 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCL1P09341 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CXCL1P09341 AC005181.1-201ENST00000604782 1256 ntBASIC13.99□□□□□ -0.17
CXCL1P09341 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.99□□□□□ -0.17
CXCL1P09341 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCL1P09341 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.99□□□□□ -0.17
CXCL1P09341 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCL1P09341 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCL1P09341 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCL1P09341 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CXCL1P09341 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL1P09341 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms