Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DOAP06340 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
HLA-DOAP06340 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.2■□□□□ 0.98
HLA-DOAP06340 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DOAP06340 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DOAP06340 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HLA-DOAP06340 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.19■□□□□ 0.98
HLA-DOAP06340 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HLA-DOAP06340 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.19■□□□□ 0.98
HLA-DOAP06340 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.19■□□□□ 0.98
HLA-DOAP06340 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.19■□□□□ 0.98
HLA-DOAP06340 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.19■□□□□ 0.98
HLA-DOAP06340 AC018712.1-201ENST00000455767 687 ntBASIC21.19■□□□□ 0.98
HLA-DOAP06340 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.19■□□□□ 0.98
HLA-DOAP06340 RNPS1P1-201ENST00000507437 918 ntBASIC21.19■□□□□ 0.98
HLA-DOAP06340 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.19■□□□□ 0.98
HLA-DOAP06340 AC148477.8-201ENST00000624298 468 ntBASIC21.19■□□□□ 0.98
HLA-DOAP06340 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.19■□□□□ 0.98
HLA-DOAP06340 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.19■□□□□ 0.98
HLA-DOAP06340 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DOAP06340 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.19■□□□□ 0.98
HLA-DOAP06340 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DOAP06340 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DOAP06340 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DOAP06340 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.18■□□□□ 0.98
HLA-DOAP06340 AC007967.3-201ENST00000434308 558 ntBASIC21.18■□□□□ 0.98
HLA-DOAP06340 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.18■□□□□ 0.98
HLA-DOAP06340 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.18■□□□□ 0.98
HLA-DOAP06340 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DOAP06340 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
HLA-DOAP06340 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.18■□□□□ 0.98
HLA-DOAP06340 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.18■□□□□ 0.98
HLA-DOAP06340 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DOAP06340 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
HLA-DOAP06340 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DOAP06340 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HLA-DOAP06340 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.17■□□□□ 0.98
HLA-DOAP06340 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DOAP06340 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HLA-DOAP06340 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HLA-DOAP06340 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DOAP06340 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DOAP06340 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.17■□□□□ 0.98
HLA-DOAP06340 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DOAP06340 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HLA-DOAP06340 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.17■□□□□ 0.98
HLA-DOAP06340 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.17■□□□□ 0.98
HLA-DOAP06340 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.17■□□□□ 0.98
HLA-DOAP06340 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.17■□□□□ 0.98
HLA-DOAP06340 DUTP2-201ENST00000519164 463 ntBASIC21.17■□□□□ 0.98
HLA-DOAP06340 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HLA-DOAP06340 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DOAP06340 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DOAP06340 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DOAP06340 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DOAP06340 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.17■□□□□ 0.98
HLA-DOAP06340 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DOAP06340 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DOAP06340 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HLA-DOAP06340 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DOAP06340 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DOAP06340 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HLA-DOAP06340 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DOAP06340 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HLA-DOAP06340 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DOAP06340 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.16■□□□□ 0.98
HLA-DOAP06340 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DOAP06340 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DOAP06340 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.16■□□□□ 0.98
HLA-DOAP06340 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DOAP06340 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DOAP06340 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.16■□□□□ 0.98
HLA-DOAP06340 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DOAP06340 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DOAP06340 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HLA-DOAP06340 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DOAP06340 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HLA-DOAP06340 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DOAP06340 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DOAP06340 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.16■□□□□ 0.98
HLA-DOAP06340 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HLA-DOAP06340 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DOAP06340 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.16■□□□□ 0.98
HLA-DOAP06340 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms