Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.52□□□□□ -0.08
APOC3P02656 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOC3P02656 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOC3P02656 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOC3P02656 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.52□□□□□ -0.08
APOC3P02656 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOC3P02656 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOC3P02656 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOC3P02656 MIR600HG-201ENST00000449175 5984 ntBASIC14.52□□□□□ -0.08
APOC3P02656 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.52□□□□□ -0.08
APOC3P02656 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOC3P02656 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.52□□□□□ -0.09
APOC3P02656 RARRES2P2-201ENST00000394842 485 ntBASIC14.52□□□□□ -0.09
APOC3P02656 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.52□□□□□ -0.09
APOC3P02656 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.52□□□□□ -0.09
APOC3P02656 MYC-208ENST00000641036 567 ntBASIC14.52□□□□□ -0.09
APOC3P02656 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOC3P02656 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.52□□□□□ -0.09
APOC3P02656 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
APOC3P02656 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
APOC3P02656 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
APOC3P02656 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOC3P02656 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOC3P02656 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
APOC3P02656 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.52□□□□□ -0.09
APOC3P02656 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.51□□□□□ -0.09
APOC3P02656 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 AL355312.1-201ENST00000407115 2176 ntBASIC14.51□□□□□ -0.09
APOC3P02656 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
APOC3P02656 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
APOC3P02656 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.51□□□□□ -0.09
APOC3P02656 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
APOC3P02656 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.51□□□□□ -0.09
APOC3P02656 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
APOC3P02656 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.51□□□□□ -0.09
APOC3P02656 YBX1P1-201ENST00000445822 960 ntBASIC14.51□□□□□ -0.09
APOC3P02656 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
APOC3P02656 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.51□□□□□ -0.09
APOC3P02656 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC14.51□□□□□ -0.09
APOC3P02656 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
APOC3P02656 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.51□□□□□ -0.09
APOC3P02656 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.51□□□□□ -0.09
APOC3P02656 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
APOC3P02656 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.51□□□□□ -0.09
APOC3P02656 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOC3P02656 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 AC087633.2-202ENST00000565166 1439 ntBASIC14.5□□□□□ -0.09
APOC3P02656 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
APOC3P02656 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.5□□□□□ -0.09
APOC3P02656 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
APOC3P02656 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC14.5□□□□□ -0.09
APOC3P02656 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
APOC3P02656 BX664725.1-201ENST00000438252 379 ntBASIC14.5□□□□□ -0.09
APOC3P02656 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.5□□□□□ -0.09
APOC3P02656 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC14.5□□□□□ -0.09
APOC3P02656 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
APOC3P02656 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
APOC3P02656 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.5□□□□□ -0.09
APOC3P02656 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms