Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DRAP01903 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DRAP01903 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DRAP01903 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 AL358472.4-201ENST00000633140 710 ntBASIC19.4■□□□□ 0.7
HLA-DRAP01903 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DRAP01903 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DRAP01903 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.4■□□□□ 0.7
HLA-DRAP01903 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DRAP01903 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DRAP01903 AC100803.2-201ENST00000562459 1963 ntBASIC19.39■□□□□ 0.7
HLA-DRAP01903 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DRAP01903 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.39■□□□□ 0.69
HLA-DRAP01903 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.39■□□□□ 0.69
HLA-DRAP01903 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.39■□□□□ 0.69
HLA-DRAP01903 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DRAP01903 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 IER3-202ENST00000376377 1350 ntBASIC19.39■□□□□ 0.69
HLA-DRAP01903 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HLA-DRAP01903 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HLA-DRAP01903 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HLA-DRAP01903 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.39■□□□□ 0.69
HLA-DRAP01903 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.39■□□□□ 0.69
HLA-DRAP01903 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HLA-DRAP01903 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DRAP01903 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
HLA-DRAP01903 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DRAP01903 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DRAP01903 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DRAP01903 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HLA-DRAP01903 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DRAP01903 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DRAP01903 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DRAP01903 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HLA-DRAP01903 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DRAP01903 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DRAP01903 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HLA-DRAP01903 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DRAP01903 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DRAP01903 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.38■□□□□ 0.69
HLA-DRAP01903 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
HLA-DRAP01903 KRT8P26-201ENST00000534154 1276 ntBASIC19.38■□□□□ 0.69
HLA-DRAP01903 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-DRAP01903 KRT18P55-202ENST00000578578 1546 ntBASIC19.38■□□□□ 0.69
HLA-DRAP01903 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.38■□□□□ 0.69
HLA-DRAP01903 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-DRAP01903 AC022898.2-201ENST00000616822 1312 ntBASIC19.38■□□□□ 0.69
HLA-DRAP01903 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DRAP01903 AP000550.4-202ENST00000639755 178 ntBASIC19.38■□□□□ 0.69
HLA-DRAP01903 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.38■□□□□ 0.69
HLA-DRAP01903 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DRAP01903 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DRAP01903 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DRAP01903 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DRAP01903 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DRAP01903 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.37■□□□□ 0.69
HLA-DRAP01903 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.37■□□□□ 0.69
HLA-DRAP01903 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DRAP01903 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.37■□□□□ 0.69
HLA-DRAP01903 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DRAP01903 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DRAP01903 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DRAP01903 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DRAP01903 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HLA-DRAP01903 AC068472.1-201ENST00000474589 881 ntBASIC19.37■□□□□ 0.69
HLA-DRAP01903 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.37■□□□□ 0.69
HLA-DRAP01903 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DRAP01903 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.37■□□□□ 0.69
HLA-DRAP01903 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HLA-DRAP01903 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HLA-DRAP01903 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms