Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PRAMEF1O95521 AC090340.1-201ENST00000620778 4980 ntBASIC17.96■□□□□ 0.46
PRAMEF1O95521 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 TSPY12P-201ENST00000421279 868 ntBASIC17.95■□□□□ 0.46
PRAMEF1O95521 KRT18P65-201ENST00000439811 1286 ntBASIC17.95■□□□□ 0.46
PRAMEF1O95521 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 DUTP2-201ENST00000519164 463 ntBASIC17.95■□□□□ 0.46
PRAMEF1O95521 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF1O95521 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEF1O95521 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 IER3-202ENST00000376377 1350 ntBASIC17.94■□□□□ 0.46
PRAMEF1O95521 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 TSPY22P-201ENST00000427496 604 ntBASIC17.94■□□□□ 0.46
PRAMEF1O95521 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 AC116407.4-201ENST00000623319 1061 ntBASIC17.94■□□□□ 0.46
PRAMEF1O95521 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PRAMEF1O95521 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF1O95521 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF1O95521 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PRAMEF1O95521 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF1O95521 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF1O95521 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF1O95521 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.93■□□□□ 0.46
PRAMEF1O95521 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.93■□□□□ 0.46
PRAMEF1O95521 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF1O95521 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF1O95521 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF1O95521 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF1O95521 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF1O95521 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF1O95521 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.93■□□□□ 0.46
PRAMEF1O95521 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF1O95521 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF1O95521 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.93■□□□□ 0.46
PRAMEF1O95521 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF1O95521 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.93■□□□□ 0.46
PRAMEF1O95521 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms