Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.84■□□□□ 0.61
OPHN1O60890 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
OPHN1O60890 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
OPHN1O60890 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
OPHN1O60890 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
OPHN1O60890 ESPNP-201ENST00000270691 2015 ntBASIC18.83■□□□□ 0.61
OPHN1O60890 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
OPHN1O60890 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
OPHN1O60890 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
OPHN1O60890 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
OPHN1O60890 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.83■□□□□ 0.61
OPHN1O60890 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
OPHN1O60890 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
OPHN1O60890 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.83■□□□□ 0.6
OPHN1O60890 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.83■□□□□ 0.6
OPHN1O60890 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.83■□□□□ 0.6
OPHN1O60890 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
OPHN1O60890 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.83■□□□□ 0.6
OPHN1O60890 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
OPHN1O60890 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
OPHN1O60890 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
OPHN1O60890 AL163051.1-201ENST00000569214 1512 ntBASIC18.83■□□□□ 0.6
OPHN1O60890 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.83■□□□□ 0.6
OPHN1O60890 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.83■□□□□ 0.6
OPHN1O60890 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
OPHN1O60890 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
OPHN1O60890 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
OPHN1O60890 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.83■□□□□ 0.6
OPHN1O60890 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.83■□□□□ 0.6
OPHN1O60890 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
OPHN1O60890 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
OPHN1O60890 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
OPHN1O60890 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
OPHN1O60890 KRT18P23-201ENST00000435622 1283 ntBASIC18.82■□□□□ 0.6
OPHN1O60890 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.82■□□□□ 0.6
OPHN1O60890 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
OPHN1O60890 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.82■□□□□ 0.6
OPHN1O60890 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
OPHN1O60890 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.82■□□□□ 0.6
OPHN1O60890 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
OPHN1O60890 AL133373.2-201ENST00000623187 2828 ntBASIC18.82■□□□□ 0.6
OPHN1O60890 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OPHN1O60890 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
OPHN1O60890 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OPHN1O60890 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.81■□□□□ 0.6
OPHN1O60890 GMCL1P1-201ENST00000463439 1581 ntBASIC18.81■□□□□ 0.6
OPHN1O60890 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
OPHN1O60890 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.81■□□□□ 0.6
OPHN1O60890 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.81■□□□□ 0.6
OPHN1O60890 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.81■□□□□ 0.6
OPHN1O60890 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
OPHN1O60890 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OPHN1O60890 MIR149-201ENST00000384879 89 ntBASIC18.81■□□□□ 0.6
OPHN1O60890 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.81■□□□□ 0.6
OPHN1O60890 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OPHN1O60890 GCSHP2-201ENST00000560971 527 ntBASIC18.81■□□□□ 0.6
OPHN1O60890 PRELID1P1-202ENST00000567272 903 ntBASIC18.81■□□□□ 0.6
OPHN1O60890 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.81■□□□□ 0.6
OPHN1O60890 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.81■□□□□ 0.6
OPHN1O60890 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.81■□□□□ 0.6
OPHN1O60890 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OPHN1O60890 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
OPHN1O60890 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.81■□□□□ 0.6
OPHN1O60890 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.81■□□□□ 0.6
OPHN1O60890 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
OPHN1O60890 HYMAI.1-201ENST00000620949 238 ntBASIC18.81■□□□□ 0.6
OPHN1O60890 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
OPHN1O60890 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.81■□□□□ 0.6
OPHN1O60890 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.81■□□□□ 0.6
OPHN1O60890 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OPHN1O60890 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.81■□□□□ 0.6
OPHN1O60890 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OPHN1O60890 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.81■□□□□ 0.6
OPHN1O60890 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.81■□□□□ 0.6
OPHN1O60890 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OPHN1O60890 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
OPHN1O60890 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
OPHN1O60890 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OPHN1O60890 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OPHN1O60890 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms