Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDH7O60245 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCDH7O60245 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDH7O60245 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDH7O60245 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PCDH7O60245 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.25■□□□□ 0.35
PCDH7O60245 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PCDH7O60245 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDH7O60245 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH7O60245 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDH7O60245 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH7O60245 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDH7O60245 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH7O60245 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH7O60245 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH7O60245 AC012317.2-201ENST00000623305 2251 ntBASIC17.24■□□□□ 0.35
PCDH7O60245 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH7O60245 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH7O60245 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH7O60245 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH7O60245 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDH7O60245 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH7O60245 AC113347.1-201ENST00000413321 391 ntBASIC17.24■□□□□ 0.35
PCDH7O60245 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH7O60245 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.24■□□□□ 0.35
PCDH7O60245 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.24■□□□□ 0.35
PCDH7O60245 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PCDH7O60245 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDH7O60245 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH7O60245 AC005363.2-201ENST00000618631 242 ntBASIC17.24■□□□□ 0.35
PCDH7O60245 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDH7O60245 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDH7O60245 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH7O60245 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH7O60245 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH7O60245 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PCDH7O60245 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH7O60245 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH7O60245 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDH7O60245 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDH7O60245 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH7O60245 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH7O60245 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH7O60245 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH7O60245 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH7O60245 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH7O60245 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDH7O60245 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDH7O60245 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH7O60245 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH7O60245 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH7O60245 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH7O60245 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
PCDH7O60245 COX11P1-201ENST00000489116 835 ntBASIC17.23■□□□□ 0.35
PCDH7O60245 DUTP2-201ENST00000519164 463 ntBASIC17.23■□□□□ 0.35
PCDH7O60245 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDH7O60245 AC012306.2-201ENST00000609350 630 ntBASIC17.23■□□□□ 0.35
PCDH7O60245 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH7O60245 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PCDH7O60245 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH7O60245 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH7O60245 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.23■□□□□ 0.35
PCDH7O60245 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH7O60245 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH7O60245 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH7O60245 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PCDH7O60245 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH7O60245 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH7O60245 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH7O60245 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH7O60245 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH7O60245 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH7O60245 FZD10-202ENST00000539839 3282 ntBASIC17.22■□□□□ 0.35
PCDH7O60245 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH7O60245 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDH7O60245 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH7O60245 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH7O60245 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH7O60245 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH7O60245 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDH7O60245 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PCDH7O60245 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH7O60245 AL137013.1-201ENST00000432946 1228 ntBASIC17.22■□□□□ 0.35
PCDH7O60245 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH7O60245 RASA4DP-201ENST00000460726 1199 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms