Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.61■□□□□ 0.41
PEX1O43933 AL137013.1-201ENST00000432946 1228 ntBASIC17.61■□□□□ 0.41
PEX1O43933 SLC25A3P1-201ENST00000443844 931 ntBASIC17.61■□□□□ 0.41
PEX1O43933 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PEX1O43933 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.61■□□□□ 0.41
PEX1O43933 AC128688.1-201ENST00000487626 519 ntBASIC17.61■□□□□ 0.41
PEX1O43933 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.61■□□□□ 0.41
PEX1O43933 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.61■□□□□ 0.41
PEX1O43933 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.61■□□□□ 0.41
PEX1O43933 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.61■□□□□ 0.41
PEX1O43933 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PEX1O43933 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PEX1O43933 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PEX1O43933 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PEX1O43933 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PEX1O43933 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.61■□□□□ 0.41
PEX1O43933 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PEX1O43933 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PEX1O43933 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.61■□□□□ 0.41
PEX1O43933 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PEX1O43933 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PEX1O43933 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PEX1O43933 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PEX1O43933 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PEX1O43933 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.61■□□□□ 0.41
PEX1O43933 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.6■□□□□ 0.41
PEX1O43933 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.6■□□□□ 0.41
PEX1O43933 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.6■□□□□ 0.41
PEX1O43933 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.6■□□□□ 0.41
PEX1O43933 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.6■□□□□ 0.41
PEX1O43933 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 AC096733.2-201ENST00000609937 1394 ntBASIC17.6■□□□□ 0.41
PEX1O43933 FLJ13224-201ENST00000313737 1514 ntBASIC17.6■□□□□ 0.41
PEX1O43933 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.6■□□□□ 0.41
PEX1O43933 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.6■□□□□ 0.41
PEX1O43933 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PEX1O43933 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.59■□□□□ 0.41
PEX1O43933 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PEX1O43933 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.59■□□□□ 0.41
PEX1O43933 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.59■□□□□ 0.41
PEX1O43933 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.59■□□□□ 0.41
PEX1O43933 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.59■□□□□ 0.41
PEX1O43933 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.59■□□□□ 0.41
PEX1O43933 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PEX1O43933 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PEX1O43933 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PEX1O43933 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.59■□□□□ 0.41
PEX1O43933 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
PEX1O43933 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PEX1O43933 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.59■□□□□ 0.41
PEX1O43933 ECEL1P2-202ENST00000465689 757 ntBASIC17.59■□□□□ 0.41
PEX1O43933 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.59■□□□□ 0.41
PEX1O43933 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.59■□□□□ 0.41
PEX1O43933 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.59■□□□□ 0.41
PEX1O43933 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.59■□□□□ 0.41
PEX1O43933 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PEX1O43933 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
PEX1O43933 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 AC011676.5-201ENST00000624864 2660 ntBASIC17.59■□□□□ 0.41
PEX1O43933 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PEX1O43933 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 AC022211.2-201ENST00000585075 2527 ntBASIC17.59■□□□□ 0.41
PEX1O43933 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PEX1O43933 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms