Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.4■□□□□ 0.06
SSNA1O43805 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
SSNA1O43805 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.4■□□□□ 0.06
SSNA1O43805 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
SSNA1O43805 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
SSNA1O43805 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
SSNA1O43805 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
SSNA1O43805 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
SSNA1O43805 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SSNA1O43805 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.39■□□□□ 0.05
SSNA1O43805 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.39■□□□□ 0.05
SSNA1O43805 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.39■□□□□ 0.05
SSNA1O43805 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SSNA1O43805 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.39■□□□□ 0.05
SSNA1O43805 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 KRT19P1-201ENST00000405746 1186 ntBASIC15.39■□□□□ 0.05
SSNA1O43805 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.39■□□□□ 0.05
SSNA1O43805 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.39■□□□□ 0.05
SSNA1O43805 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
SSNA1O43805 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.39■□□□□ 0.05
SSNA1O43805 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SSNA1O43805 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.39■□□□□ 0.05
SSNA1O43805 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.39■□□□□ 0.05
SSNA1O43805 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.39■□□□□ 0.05
SSNA1O43805 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.39■□□□□ 0.05
SSNA1O43805 MYLKP1-201ENST00000509077 1580 ntBASIC15.39■□□□□ 0.05
SSNA1O43805 AL138688.1-201ENST00000624851 1594 ntBASIC15.39■□□□□ 0.05
SSNA1O43805 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.39■□□□□ 0.05
SSNA1O43805 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SSNA1O43805 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.39■□□□□ 0.05
SSNA1O43805 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SSNA1O43805 AL355312.1-201ENST00000407115 2176 ntBASIC15.39■□□□□ 0.05
SSNA1O43805 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SSNA1O43805 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SSNA1O43805 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SSNA1O43805 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.39■□□□□ 0.05
SSNA1O43805 MIR600HG-201ENST00000449175 5984 ntBASIC15.39■□□□□ 0.05
SSNA1O43805 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
SSNA1O43805 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
SSNA1O43805 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.38■□□□□ 0.05
SSNA1O43805 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.38■□□□□ 0.05
SSNA1O43805 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
SSNA1O43805 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.38■□□□□ 0.05
SSNA1O43805 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.38■□□□□ 0.05
SSNA1O43805 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
SSNA1O43805 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SSNA1O43805 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SSNA1O43805 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.38■□□□□ 0.05
SSNA1O43805 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.38■□□□□ 0.05
SSNA1O43805 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.38■□□□□ 0.05
SSNA1O43805 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.38■□□□□ 0.05
SSNA1O43805 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.38■□□□□ 0.05
SSNA1O43805 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 MST1L-201ENST00000442552 2185 ntBASIC15.38■□□□□ 0.05
SSNA1O43805 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SSNA1O43805 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.38■□□□□ 0.05
SSNA1O43805 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SSNA1O43805 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms