Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SNAI2O43623 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.53□□□□□ -0.24
SNAI2O43623 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.53□□□□□ -0.24
SNAI2O43623 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.53□□□□□ -0.24
SNAI2O43623 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SNAI2O43623 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.53□□□□□ -0.24
SNAI2O43623 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
SNAI2O43623 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.53□□□□□ -0.24
SNAI2O43623 AL138781.1-201ENST00000566567 1274 ntBASIC13.53□□□□□ -0.24
SNAI2O43623 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.53□□□□□ -0.24
SNAI2O43623 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.53□□□□□ -0.24
SNAI2O43623 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.53□□□□□ -0.24
SNAI2O43623 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.53□□□□□ -0.24
SNAI2O43623 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SNAI2O43623 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.53□□□□□ -0.24
SNAI2O43623 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.53□□□□□ -0.24
SNAI2O43623 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SNAI2O43623 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.53□□□□□ -0.24
SNAI2O43623 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SNAI2O43623 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.53□□□□□ -0.24
SNAI2O43623 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SNAI2O43623 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SNAI2O43623 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SNAI2O43623 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNAI2O43623 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNAI2O43623 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNAI2O43623 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNAI2O43623 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
SNAI2O43623 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
SNAI2O43623 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SNAI2O43623 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNAI2O43623 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNAI2O43623 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
SNAI2O43623 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SNAI2O43623 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNAI2O43623 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNAI2O43623 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.52□□□□□ -0.25
SNAI2O43623 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.52□□□□□ -0.25
SNAI2O43623 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SNAI2O43623 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.52□□□□□ -0.25
SNAI2O43623 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.52□□□□□ -0.25
SNAI2O43623 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.52□□□□□ -0.25
SNAI2O43623 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.52□□□□□ -0.25
SNAI2O43623 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.52□□□□□ -0.25
SNAI2O43623 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.52□□□□□ -0.25
SNAI2O43623 AL445675.2-201ENST00000620291 557 ntBASIC13.52□□□□□ -0.25
SNAI2O43623 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.52□□□□□ -0.25
SNAI2O43623 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.52□□□□□ -0.25
SNAI2O43623 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
SNAI2O43623 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.52□□□□□ -0.25
SNAI2O43623 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 NKILA-202ENST00000614771 2598 ntBASIC13.52□□□□□ -0.25
SNAI2O43623 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.52□□□□□ -0.25
SNAI2O43623 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNAI2O43623 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
SNAI2O43623 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 AL645608.8-201ENST00000606034 2086 ntBASIC13.51□□□□□ -0.25
SNAI2O43623 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SNAI2O43623 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.51□□□□□ -0.25
SNAI2O43623 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SNAI2O43623 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SNAI2O43623 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms