Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PHGDHO43175 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.97■□□□□ 0.47
PHGDHO43175 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PHGDHO43175 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PHGDHO43175 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PHGDHO43175 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PHGDHO43175 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.97■□□□□ 0.47
PHGDHO43175 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PHGDHO43175 PP12613-201ENST00000424958 2230 ntBASIC17.96■□□□□ 0.47
PHGDHO43175 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 AC132938.6-201ENST00000623828 1655 ntBASIC17.96■□□□□ 0.47
PHGDHO43175 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.96■□□□□ 0.47
PHGDHO43175 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.96■□□□□ 0.47
PHGDHO43175 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
PHGDHO43175 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.96■□□□□ 0.47
PHGDHO43175 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PHGDHO43175 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.96■□□□□ 0.47
PHGDHO43175 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
PHGDHO43175 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.96■□□□□ 0.47
PHGDHO43175 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.96■□□□□ 0.47
PHGDHO43175 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.96■□□□□ 0.47
PHGDHO43175 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
PHGDHO43175 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PHGDHO43175 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
PHGDHO43175 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHGDHO43175 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PHGDHO43175 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.95■□□□□ 0.46
PHGDHO43175 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHGDHO43175 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHGDHO43175 AC100803.2-201ENST00000562459 1963 ntBASIC17.95■□□□□ 0.46
PHGDHO43175 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PHGDHO43175 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.95■□□□□ 0.46
PHGDHO43175 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.95■□□□□ 0.46
PHGDHO43175 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHGDHO43175 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHGDHO43175 MMP23A-201ENST00000234610 1017 ntBASIC17.95■□□□□ 0.46
PHGDHO43175 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.95■□□□□ 0.46
PHGDHO43175 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHGDHO43175 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PHGDHO43175 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PHGDHO43175 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PHGDHO43175 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.95■□□□□ 0.46
PHGDHO43175 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.95■□□□□ 0.46
PHGDHO43175 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.95■□□□□ 0.46
PHGDHO43175 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.95■□□□□ 0.46
PHGDHO43175 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHGDHO43175 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHGDHO43175 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.95■□□□□ 0.46
PHGDHO43175 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.95■□□□□ 0.46
PHGDHO43175 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.95■□□□□ 0.46
PHGDHO43175 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
PHGDHO43175 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHGDHO43175 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.95■□□□□ 0.46
PHGDHO43175 AC139713.2-201ENST00000641328 2723 ntBASIC17.95■□□□□ 0.46
PHGDHO43175 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHGDHO43175 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.95■□□□□ 0.46
PHGDHO43175 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHGDHO43175 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHGDHO43175 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHGDHO43175 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHGDHO43175 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PHGDHO43175 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
PHGDHO43175 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHGDHO43175 AC012313.1-201ENST00000593393 3059 ntBASIC17.94■□□□□ 0.46
PHGDHO43175 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHGDHO43175 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.94■□□□□ 0.46
PHGDHO43175 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHGDHO43175 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PHGDHO43175 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.94■□□□□ 0.46
PHGDHO43175 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.94■□□□□ 0.46
PHGDHO43175 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PHGDHO43175 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.94■□□□□ 0.46
PHGDHO43175 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.94■□□□□ 0.46
PHGDHO43175 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.94■□□□□ 0.46
PHGDHO43175 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.94■□□□□ 0.46
PHGDHO43175 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PHGDHO43175 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PHGDHO43175 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHGDHO43175 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHGDHO43175 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHGDHO43175 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms