Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 AC246785.2-201ENST00000432512 513 ntBASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 VENTXP7-201ENST00000475503 772 ntBASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 AC004263.2-201ENST00000617183 678 ntBASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA3F8WFD2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 FAAHP1-202ENST00000446499 1238 ntBASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 KRT17P6-201ENST00000453795 1220 ntBASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 EMBP1-201ENST00000458200 901 ntBASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 RN7SL606P-201ENST00000472779 293 ntBASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 KRT18P31-201ENST00000506277 1292 ntBASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 AC011840.4-201ENST00000578471 627 ntBASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.42■□□□□ 0.22
NPIPA3F8WFD2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 AC104581.1-202ENST00000635932 2618 ntBASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms