Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 DRAXINP1-201ENST00000437611 948 ntBASIC14.22□□□□□ -0.13
LINC01548A6NM66 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 TOB2P1-201ENST00000469761 992 ntBASIC14.22□□□□□ -0.13
LINC01548A6NM66 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 KRT18P56-201ENST00000507275 550 ntBASIC14.22□□□□□ -0.13
LINC01548A6NM66 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 AL354751.1-201ENST00000412768 1863 ntBASIC14.22□□□□□ -0.13
LINC01548A6NM66 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LINC01548A6NM66 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01548A6NM66 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 KRT18P65-201ENST00000439811 1286 ntBASIC14.21□□□□□ -0.13
LINC01548A6NM66 MTCL1P1-201ENST00000446207 792 ntBASIC14.21□□□□□ -0.13
LINC01548A6NM66 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 AP000867.3-201ENST00000524675 377 ntBASIC14.21□□□□□ -0.13
LINC01548A6NM66 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 AP005901.3-202ENST00000581653 237 ntBASIC14.21□□□□□ -0.13
LINC01548A6NM66 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 AC009154.2-201ENST00000621177 724 ntBASIC14.21□□□□□ -0.13
LINC01548A6NM66 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.21□□□□□ -0.13
LINC01548A6NM66 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01548A6NM66 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01548A6NM66 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.21□□□□□ -0.14
LINC01548A6NM66 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.21□□□□□ -0.14
LINC01548A6NM66 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC01548A6NM66 FZD10-202ENST00000539839 3282 ntBASIC14.21□□□□□ -0.14
LINC01548A6NM66 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
LINC01548A6NM66 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC01548A6NM66 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC01548A6NM66 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms