Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 AC079776.2-201ENST00000641154 1609 ntBASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC144AA2RUR9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 AC135776.1-201ENST00000319817 2481 ntBASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
CCDC144AA2RUR9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 AL138781.2-201ENST00000617896 1843 ntBASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 NKAPP1-205ENST00000585790 367 ntBASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC25.79■■□□□ 1.72
CCDC144AA2RUR9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC144AA2RUR9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 MIR574-201ENST00000385209 96 ntBASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 IGHV3-22-201ENST00000520721 359 ntBASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 OR7E14P-202ENST00000530490 1290 ntBASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 AC012640.2-201ENST00000561606 901 ntBASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 MTDHP4-201ENST00000600287 670 ntBASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 AC100803.2-201ENST00000562459 1963 ntBASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC144AA2RUR9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.72
CCDC144AA2RUR9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC25.76■■□□□ 1.72
CCDC144AA2RUR9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC144AA2RUR9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms