Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCE3A1L190 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCE3A1L190 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCE3A1L190 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCE3A1L190 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.55■□□□□ 0.88
SYCE3A1L190 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.55■□□□□ 0.88
SYCE3A1L190 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCE3A1L190 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCE3A1L190 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.55■□□□□ 0.88
SYCE3A1L190 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCE3A1L190 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCE3A1L190 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SYCE3A1L190 MIR149-201ENST00000384879 89 ntBASIC20.55■□□□□ 0.88
SYCE3A1L190 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.55■□□□□ 0.88
SYCE3A1L190 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCE3A1L190 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.55■□□□□ 0.88
SYCE3A1L190 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SYCE3A1L190 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SYCE3A1L190 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
SYCE3A1L190 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCE3A1L190 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SYCE3A1L190 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.55■□□□□ 0.88
SYCE3A1L190 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCE3A1L190 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCE3A1L190 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.55■□□□□ 0.88
SYCE3A1L190 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SYCE3A1L190 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SYCE3A1L190 CICP6-201ENST00000457191 2729 ntBASIC20.55■□□□□ 0.88
SYCE3A1L190 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 AGGF1P2-201ENST00000426656 2106 ntBASIC20.54■□□□□ 0.88
SYCE3A1L190 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.54■□□□□ 0.88
SYCE3A1L190 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
SYCE3A1L190 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.54■□□□□ 0.88
SYCE3A1L190 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.54■□□□□ 0.88
SYCE3A1L190 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SYCE3A1L190 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SYCE3A1L190 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.54■□□□□ 0.88
SYCE3A1L190 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.54■□□□□ 0.88
SYCE3A1L190 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SYCE3A1L190 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SYCE3A1L190 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.54■□□□□ 0.88
SYCE3A1L190 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYCE3A1L190 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SYCE3A1L190 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SYCE3A1L190 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.53■□□□□ 0.88
SYCE3A1L190 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SYCE3A1L190 AC239809.2-201ENST00000415381 517 ntBASIC20.53■□□□□ 0.88
SYCE3A1L190 AC069152.1-201ENST00000438030 544 ntBASIC20.53■□□□□ 0.88
SYCE3A1L190 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.53■□□□□ 0.88
SYCE3A1L190 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.53■□□□□ 0.88
SYCE3A1L190 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.53■□□□□ 0.88
SYCE3A1L190 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.53■□□□□ 0.88
SYCE3A1L190 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.53■□□□□ 0.88
SYCE3A1L190 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.53■□□□□ 0.88
SYCE3A1L190 AC105020.1-201ENST00000435356 2205 ntBASIC20.53■□□□□ 0.88
SYCE3A1L190 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCE3A1L190 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SYCE3A1L190 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYCE3A1L190 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.52■□□□□ 0.88
SYCE3A1L190 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYCE3A1L190 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYCE3A1L190 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYCE3A1L190 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.52■□□□□ 0.88
SYCE3A1L190 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYCE3A1L190 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYCE3A1L190 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
SYCE3A1L190 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.52■□□□□ 0.88
SYCE3A1L190 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms