Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 AL645929.1-201ENST00000420084 975 ntBASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 FAM210CP-201ENST00000445714 574 ntBASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 MTCL1P1-201ENST00000446207 792 ntBASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 PP12613-201ENST00000424958 2230 ntBASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 DDX43P3-201ENST00000441064 443 ntBASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 LINC01238-205ENST00000567549 1107 ntBASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV5S1A1TA0A578 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 RN7SL606P-201ENST00000472779 293 ntBASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV5S1A1TA0A578 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
TCRBV5S1A1TA0A578 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.77■□□□□ 0.59
TCRBV5S1A1TA0A578 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TCRBV5S1A1TA0A578 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.77■□□□□ 0.59
TCRBV5S1A1TA0A578 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TCRBV5S1A1TA0A578 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
TCRBV5S1A1TA0A578 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 AC133963.1-201ENST00000504166 1679 ntBASIC18.76■□□□□ 0.59
TCRBV5S1A1TA0A578 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms