Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 NIFKP9-201ENST00000419265 221 ntBASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 UBALD1-205ENST00000590891 2641 ntBASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 GPAT2P1-201ENST00000444924 1672 ntBASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 AC006970.2-201ENST00000450065 779 ntBASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 AC011298.2-201ENST00000617989 482 ntBASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.87■□□□□ 0.13
TRDV1A0A1B0GX56 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.86■□□□□ 0.13
TRDV1A0A1B0GX56 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms