Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 AC106820.2-201ENST00000563775 3264 ntBASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 ECEL1P2-202ENST00000465689 757 ntBASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 FAM87A-204ENST00000613235 858 ntBASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAV27A0A087WT01 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 MMP23A-201ENST00000234610 1017 ntBASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 AC132938.6-201ENST00000623828 1655 ntBASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAV27A0A087WT01 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 AC100803.2-201ENST00000562459 1963 ntBASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms