Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV30A0A087WSZ9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV30A0A087WSZ9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV30A0A087WSZ9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV30A0A087WSZ9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.21□□□□□ -0.14
TRAV30A0A087WSZ9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV30A0A087WSZ9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV30A0A087WSZ9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.21□□□□□ -0.14
TRAV30A0A087WSZ9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
TRAV30A0A087WSZ9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV30A0A087WSZ9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV30A0A087WSZ9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV30A0A087WSZ9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV30A0A087WSZ9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 AC007663.1-201ENST00000438948 1240 ntBASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 EGLN1P1-201ENST00000531623 762 ntBASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV30A0A087WSZ9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 AC093010.1-201ENST00000473625 1624 ntBASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 TSPY14P-201ENST00000303979 915 ntBASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 MIR1238-201ENST00000408483 83 ntBASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 AP000525.1-201ENST00000608286 694 ntBASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms