Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 KRASP1-201ENST00000407852 552 ntBASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 UNC93B5-201ENST00000530315 699 ntBASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 AC133041.1-202ENST00000642053 222 ntBASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 SDHAP2-201ENST00000455183 2001 ntBASIC15.55■□□□□ 0.08
TRAV18A0A075B6X5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 AC093010.1-201ENST00000473625 1624 ntBASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 NIFKP9-201ENST00000419265 221 ntBASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 AC008403.3-201ENST00000598924 454 ntBASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 AC008622.2-201ENST00000617006 1229 ntBASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 AL023875.1-201ENST00000640777 796 ntBASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRAV18A0A075B6X5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 KRT17P3-201ENST00000420566 1262 ntBASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 AC011298.2-201ENST00000617989 482 ntBASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms