Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.29■□□□□ 0.68
SIX4Q9UIU6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 AL138831.2-201ENST00000606564 490 ntBASIC19.28■□□□□ 0.68
SIX4Q9UIU6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 AL390961.4-201ENST00000623958 2535 ntBASIC19.28■□□□□ 0.68
SIX4Q9UIU6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SIX4Q9UIU6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 AC125634.1-201ENST00000438758 1403 ntBASIC19.27■□□□□ 0.68
SIX4Q9UIU6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 VENTXP7-201ENST00000475503 772 ntBASIC19.27■□□□□ 0.68
SIX4Q9UIU6 AC104819.1-201ENST00000504587 486 ntBASIC19.27■□□□□ 0.68
SIX4Q9UIU6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 BNIP3P18-201ENST00000593976 575 ntBASIC19.27■□□□□ 0.68
SIX4Q9UIU6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
SIX4Q9UIU6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SIX4Q9UIU6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SIX4Q9UIU6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.26■□□□□ 0.67
SIX4Q9UIU6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIX4Q9UIU6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.26■□□□□ 0.67
SIX4Q9UIU6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIX4Q9UIU6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIX4Q9UIU6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIX4Q9UIU6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SIX4Q9UIU6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.26■□□□□ 0.67
SIX4Q9UIU6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SIX4Q9UIU6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIX4Q9UIU6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.26■□□□□ 0.67
SIX4Q9UIU6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SIX4Q9UIU6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SIX4Q9UIU6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIX4Q9UIU6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIX4Q9UIU6 AC022898.2-201ENST00000616822 1312 ntBASIC19.25■□□□□ 0.67
SIX4Q9UIU6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIX4Q9UIU6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms