Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.36■□□□□ 0.85
COL20A1Q9P218 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
COL20A1Q9P218 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.36■□□□□ 0.85
COL20A1Q9P218 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
COL20A1Q9P218 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.36■□□□□ 0.85
COL20A1Q9P218 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
COL20A1Q9P218 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL20A1Q9P218 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL20A1Q9P218 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
COL20A1Q9P218 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
COL20A1Q9P218 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL20A1Q9P218 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL20A1Q9P218 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
COL20A1Q9P218 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL20A1Q9P218 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL20A1Q9P218 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL20A1Q9P218 AP005117.1-201ENST00000584346 1413 ntBASIC20.36■□□□□ 0.85
COL20A1Q9P218 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 AC097374.2-201ENST00000618617 1306 ntBASIC20.35■□□□□ 0.85
COL20A1Q9P218 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 RBM17P3-201ENST00000417687 1192 ntBASIC20.35■□□□□ 0.85
COL20A1Q9P218 ABCD1P5-201ENST00000445663 754 ntBASIC20.35■□□□□ 0.85
COL20A1Q9P218 AC018712.1-201ENST00000455767 687 ntBASIC20.35■□□□□ 0.85
COL20A1Q9P218 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.35■□□□□ 0.85
COL20A1Q9P218 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL20A1Q9P218 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL20A1Q9P218 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL20A1Q9P218 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL20A1Q9P218 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL20A1Q9P218 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL20A1Q9P218 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL20A1Q9P218 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL20A1Q9P218 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL20A1Q9P218 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL20A1Q9P218 AC096633.1-201ENST00000422446 749 ntBASIC20.34■□□□□ 0.85
COL20A1Q9P218 KRT18P67-201ENST00000432816 1264 ntBASIC20.34■□□□□ 0.85
COL20A1Q9P218 HNRNPDP1-201ENST00000439535 754 ntBASIC20.34■□□□□ 0.85
COL20A1Q9P218 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.34■□□□□ 0.85
COL20A1Q9P218 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.34■□□□□ 0.85
COL20A1Q9P218 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COL20A1Q9P218 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.34■□□□□ 0.85
COL20A1Q9P218 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL20A1Q9P218 AL049840.3-201ENST00000602669 611 ntBASIC20.34■□□□□ 0.85
COL20A1Q9P218 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.34■□□□□ 0.85
COL20A1Q9P218 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL20A1Q9P218 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COL20A1Q9P218 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL20A1Q9P218 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL20A1Q9P218 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL20A1Q9P218 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.34■□□□□ 0.85
COL20A1Q9P218 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.34■□□□□ 0.85
COL20A1Q9P218 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.33■□□□□ 0.85
COL20A1Q9P218 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL20A1Q9P218 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.33■□□□□ 0.85
COL20A1Q9P218 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.33■□□□□ 0.85
COL20A1Q9P218 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL20A1Q9P218 AC009113.1-201ENST00000570267 2443 ntBASIC20.33■□□□□ 0.85
COL20A1Q9P218 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL20A1Q9P218 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
COL20A1Q9P218 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.33■□□□□ 0.85
COL20A1Q9P218 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
COL20A1Q9P218 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL20A1Q9P218 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL20A1Q9P218 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.33■□□□□ 0.85
COL20A1Q9P218 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.33■□□□□ 0.85
COL20A1Q9P218 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.33■□□□□ 0.85
COL20A1Q9P218 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
COL20A1Q9P218 SART3-203ENST00000546611 1184 ntBASIC20.33■□□□□ 0.85
COL20A1Q9P218 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.33■□□□□ 0.85
COL20A1Q9P218 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.33■□□□□ 0.85
COL20A1Q9P218 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.33■□□□□ 0.85
COL20A1Q9P218 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms