Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 AC011840.4-201ENST00000578471 627 ntBASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 AL353801.3-201ENST00000609898 542 ntBASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPHK1Q9NYA1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 AC074051.2-201ENST00000565115 352 ntBASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 MIR3652-201ENST00000579335 131 ntBASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 LETM1P2-201ENST00000597330 2178 ntBASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPHK1Q9NYA1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 KRT17P6-201ENST00000453795 1220 ntBASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 AC112698.1-201ENST00000510299 916 ntBASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPHK1Q9NYA1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms