Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPF1Q9NWY4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 CROCCP3-202ENST00000420820 1947 ntBASIC16.74■□□□□ 0.27
HPF1Q9NWY4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 AL024508.2-201ENST00000607749 1894 ntBASIC16.74■□□□□ 0.27
HPF1Q9NWY4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 LINC00265-3P-201ENST00000447588 903 ntBASIC16.74■□□□□ 0.27
HPF1Q9NWY4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 MIR3652-201ENST00000579335 131 ntBASIC16.74■□□□□ 0.27
HPF1Q9NWY4 MIR3180-1-201ENST00000580374 94 ntBASIC16.74■□□□□ 0.27
HPF1Q9NWY4 MIR3180-3-201ENST00000584616 94 ntBASIC16.74■□□□□ 0.27
HPF1Q9NWY4 AC004263.2-201ENST00000617183 678 ntBASIC16.74■□□□□ 0.27
HPF1Q9NWY4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPF1Q9NWY4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 DRAXINP1-201ENST00000437611 948 ntBASIC16.73■□□□□ 0.27
HPF1Q9NWY4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 AC113404.2-201ENST00000507884 177 ntBASIC16.73■□□□□ 0.27
HPF1Q9NWY4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 CLEC4GP1-201ENST00000596555 870 ntBASIC16.73■□□□□ 0.27
HPF1Q9NWY4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
HPF1Q9NWY4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms