Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 KRT89P-201ENST00000620027 1478 ntBASIC15.29■□□□□ 0.04
HES4Q9HCC6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.29■□□□□ 0.04
HES4Q9HCC6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 AC113404.2-201ENST00000507884 177 ntBASIC15.29■□□□□ 0.04
HES4Q9HCC6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 DUTP2-201ENST00000519164 463 ntBASIC15.29■□□□□ 0.04
HES4Q9HCC6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 AC079602.3-201ENST00000623931 403 ntBASIC15.29■□□□□ 0.04
HES4Q9HCC6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 AC132938.6-201ENST00000623828 1655 ntBASIC15.28■□□□□ 0.04
HES4Q9HCC6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 AC068880.1-201ENST00000507289 2297 ntBASIC15.28■□□□□ 0.04
HES4Q9HCC6 AP000997.3-201ENST00000623333 2250 ntBASIC15.28■□□□□ 0.04
HES4Q9HCC6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 SPDYE15P-201ENST00000424157 909 ntBASIC15.28■□□□□ 0.04
HES4Q9HCC6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.28■□□□□ 0.04
HES4Q9HCC6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HES4Q9HCC6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HES4Q9HCC6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HES4Q9HCC6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HES4Q9HCC6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HES4Q9HCC6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HES4Q9HCC6 LINC00167-201ENST00000530583 1419 ntBASIC15.27■□□□□ 0.04
HES4Q9HCC6 AL391807.1-203ENST00000604392 2365 ntBASIC15.27■□□□□ 0.04
HES4Q9HCC6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HES4Q9HCC6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HES4Q9HCC6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HES4Q9HCC6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HES4Q9HCC6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.27■□□□□ 0.04
HES4Q9HCC6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HES4Q9HCC6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HES4Q9HCC6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HES4Q9HCC6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
HES4Q9HCC6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.27■□□□□ 0.04
HES4Q9HCC6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.27■□□□□ 0.04
HES4Q9HCC6 HLA-F-220ENST00000434407 884 ntBASIC15.27■□□□□ 0.04
HES4Q9HCC6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms