Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 AC009154.2-201ENST00000621177 724 ntBASIC20.05■□□□□ 0.8
ATP6V0A4Q9HBG4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A4Q9HBG4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A4Q9HBG4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.05■□□□□ 0.8
ATP6V0A4Q9HBG4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A4Q9HBG4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A4Q9HBG4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0A4Q9HBG4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.05■□□□□ 0.8
ATP6V0A4Q9HBG4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 KRT18P65-201ENST00000439811 1286 ntBASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 KRT17P6-201ENST00000453795 1220 ntBASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 AC104819.1-201ENST00000504587 486 ntBASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 FOSL1P1-201ENST00000511041 816 ntBASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 AC093010.1-201ENST00000473625 1624 ntBASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0A4Q9HBG4 AC132938.6-201ENST00000623828 1655 ntBASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 FDX1P1-201ENST00000449115 551 ntBASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 AC093677.2-201ENST00000600169 1863 ntBASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A4Q9HBG4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 EMBP1-201ENST00000458200 901 ntBASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 VENTXP7-201ENST00000475503 772 ntBASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 AC011840.4-201ENST00000578471 627 ntBASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 AC233702.3-201ENST00000578656 1387 ntBASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP6V0A4Q9HBG4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATP6V0A4Q9HBG4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.02■□□□□ 0.79
ATP6V0A4Q9HBG4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
ATP6V0A4Q9HBG4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.02■□□□□ 0.79
ATP6V0A4Q9HBG4 KRT8P10-201ENST00000450021 1447 ntBASIC20.02■□□□□ 0.79
ATP6V0A4Q9HBG4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A4Q9HBG4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP6V0A4Q9HBG4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A4Q9HBG4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A4Q9HBG4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP6V0A4Q9HBG4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A4Q9HBG4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A4Q9HBG4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP6V0A4Q9HBG4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A4Q9HBG4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A4Q9HBG4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms