Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 UBQLN4P1-201ENST00000461599 1801 ntBASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 RNF216P1-203ENST00000404404 2427 ntBASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 LINC00528-201ENST00000600723 2160 ntBASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CYSTM1Q9H1C7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 DUX4L28-201ENST00000623687 678 ntBASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms