Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 AC092474.2-201ENST00000424288 719 ntBASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 AC011467.2-201ENST00000598425 242 ntBASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2OQ9C0C9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 TEX21P-204ENST00000641479 1693 ntBASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
UBE2OQ9C0C9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 NKAPP1-205ENST00000585790 367 ntBASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 MIR1199-201ENST00000621445 119 ntBASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2OQ9C0C9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2OQ9C0C9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2OQ9C0C9 AC097374.2-201ENST00000618617 1306 ntBASIC19.83■□□□□ 0.77
UBE2OQ9C0C9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
UBE2OQ9C0C9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2OQ9C0C9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
UBE2OQ9C0C9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.83■□□□□ 0.77
UBE2OQ9C0C9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.83■□□□□ 0.77
UBE2OQ9C0C9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.83■□□□□ 0.77
UBE2OQ9C0C9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.83■□□□□ 0.77
UBE2OQ9C0C9 AL096865.1-201ENST00000606796 927 ntBASIC19.83■□□□□ 0.77
UBE2OQ9C0C9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.83■□□□□ 0.77
UBE2OQ9C0C9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.83■□□□□ 0.76
UBE2OQ9C0C9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.83■□□□□ 0.76
UBE2OQ9C0C9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
UBE2OQ9C0C9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2OQ9C0C9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.83■□□□□ 0.76
UBE2OQ9C0C9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2OQ9C0C9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.83■□□□□ 0.76
UBE2OQ9C0C9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms