Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 MIR5100-201ENST00000579544 119 ntBASIC20.97■□□□□ 0.95
SLF1Q9BQI6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 AC026471.1-201ENST00000564629 3026 ntBASIC20.97■□□□□ 0.95
SLF1Q9BQI6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 AF238378.1-201ENST00000526806 358 ntBASIC20.96■□□□□ 0.95
SLF1Q9BQI6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 SLC25A6P4-201ENST00000586535 553 ntBASIC20.96■□□□□ 0.95
SLF1Q9BQI6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 AL591684.3-201ENST00000605187 298 ntBASIC20.96■□□□□ 0.95
SLF1Q9BQI6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLF1Q9BQI6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.95
SLF1Q9BQI6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.95■□□□□ 0.95
SLF1Q9BQI6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 AC009113.1-201ENST00000570267 2443 ntBASIC20.95■□□□□ 0.94
SLF1Q9BQI6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 MTCL1P1-201ENST00000446207 792 ntBASIC20.95■□□□□ 0.94
SLF1Q9BQI6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLF1Q9BQI6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 MRPL3P1-201ENST00000400109 1033 ntBASIC20.94■□□□□ 0.94
SLF1Q9BQI6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 AL662844.1-201ENST00000546340 181 ntBASIC20.94■□□□□ 0.94
SLF1Q9BQI6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLF1Q9BQI6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SLF1Q9BQI6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.93■□□□□ 0.94
SLF1Q9BQI6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms