Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TWNKQ96RR1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TWNKQ96RR1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TWNKQ96RR1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TWNKQ96RR1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TWNKQ96RR1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TWNKQ96RR1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TWNKQ96RR1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TWNKQ96RR1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TWNKQ96RR1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TWNKQ96RR1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TWNKQ96RR1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
TWNKQ96RR1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TWNKQ96RR1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
TWNKQ96RR1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TWNKQ96RR1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TWNKQ96RR1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TWNKQ96RR1 AC020763.4-201ENST00000623414 4170 ntBASIC19.14■□□□□ 0.65
TWNKQ96RR1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TWNKQ96RR1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TWNKQ96RR1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TWNKQ96RR1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TWNKQ96RR1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.14■□□□□ 0.65
TWNKQ96RR1 DRAXINP1-201ENST00000437611 948 ntBASIC19.14■□□□□ 0.65
TWNKQ96RR1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TWNKQ96RR1 AC112698.1-201ENST00000510299 916 ntBASIC19.14■□□□□ 0.65
TWNKQ96RR1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.14■□□□□ 0.65
TWNKQ96RR1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.14■□□□□ 0.65
TWNKQ96RR1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.14■□□□□ 0.65
TWNKQ96RR1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TWNKQ96RR1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TWNKQ96RR1 AL353801.3-201ENST00000609898 542 ntBASIC19.14■□□□□ 0.65
TWNKQ96RR1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TWNKQ96RR1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
TWNKQ96RR1 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.14■□□□□ 0.65
TWNKQ96RR1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TWNKQ96RR1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.14■□□□□ 0.65
TWNKQ96RR1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TWNKQ96RR1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TWNKQ96RR1 AC018470.1-201ENST00000624790 3129 ntBASIC19.14■□□□□ 0.65
TWNKQ96RR1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TWNKQ96RR1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TWNKQ96RR1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TWNKQ96RR1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TWNKQ96RR1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.13■□□□□ 0.65
TWNKQ96RR1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TWNKQ96RR1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TWNKQ96RR1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TWNKQ96RR1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.13■□□□□ 0.65
TWNKQ96RR1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.13■□□□□ 0.65
TWNKQ96RR1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
TWNKQ96RR1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.13■□□□□ 0.65
TWNKQ96RR1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TWNKQ96RR1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TWNKQ96RR1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TWNKQ96RR1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.13■□□□□ 0.65
TWNKQ96RR1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TWNKQ96RR1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TWNKQ96RR1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.13■□□□□ 0.65
TWNKQ96RR1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.13■□□□□ 0.65
TWNKQ96RR1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TWNKQ96RR1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.13■□□□□ 0.65
TWNKQ96RR1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TWNKQ96RR1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TWNKQ96RR1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.12■□□□□ 0.65
TWNKQ96RR1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TWNKQ96RR1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.12■□□□□ 0.65
TWNKQ96RR1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TWNKQ96RR1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.12■□□□□ 0.65
TWNKQ96RR1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.12■□□□□ 0.65
TWNKQ96RR1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.12■□□□□ 0.65
TWNKQ96RR1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TWNKQ96RR1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TWNKQ96RR1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TWNKQ96RR1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TWNKQ96RR1 TOB2P1-201ENST00000469761 992 ntBASIC19.12■□□□□ 0.65
TWNKQ96RR1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.12■□□□□ 0.65
TWNKQ96RR1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.12■□□□□ 0.65
TWNKQ96RR1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TWNKQ96RR1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.12■□□□□ 0.65
TWNKQ96RR1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
TWNKQ96RR1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.12■□□□□ 0.65
TWNKQ96RR1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TWNKQ96RR1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TWNKQ96RR1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TWNKQ96RR1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TWNKQ96RR1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TWNKQ96RR1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TWNKQ96RR1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TWNKQ96RR1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TWNKQ96RR1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TWNKQ96RR1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.11■□□□□ 0.65
TWNKQ96RR1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TWNKQ96RR1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.11■□□□□ 0.65
TWNKQ96RR1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TWNKQ96RR1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.11■□□□□ 0.65
TWNKQ96RR1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.11■□□□□ 0.65
TWNKQ96RR1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.11■□□□□ 0.65
TWNKQ96RR1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TWNKQ96RR1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms