Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.99■□□□□ 0.95
PGBD1Q96JS3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PGBD1Q96JS3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PGBD1Q96JS3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PGBD1Q96JS3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.99■□□□□ 0.95
PGBD1Q96JS3 AC009102.3-201ENST00000623118 1491 ntBASIC20.99■□□□□ 0.95
PGBD1Q96JS3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.99■□□□□ 0.95
PGBD1Q96JS3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.99■□□□□ 0.95
PGBD1Q96JS3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PGBD1Q96JS3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 GMCL1P1-201ENST00000463439 1581 ntBASIC20.98■□□□□ 0.95
PGBD1Q96JS3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 MIR149-201ENST00000384879 89 ntBASIC20.98■□□□□ 0.95
PGBD1Q96JS3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 AL136038.3-201ENST00000561909 1096 ntBASIC20.98■□□□□ 0.95
PGBD1Q96JS3 MIR3180-4-201ENST00000582223 153 ntBASIC20.98■□□□□ 0.95
PGBD1Q96JS3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD1Q96JS3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 AC020916.1-201ENST00000587762 1774 ntBASIC20.97■□□□□ 0.95
PGBD1Q96JS3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PGBD1Q96JS3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 AL645929.1-201ENST00000420084 975 ntBASIC20.96■□□□□ 0.95
PGBD1Q96JS3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 RNF126P1-202ENST00000569893 925 ntBASIC20.96■□□□□ 0.95
PGBD1Q96JS3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 IER3-202ENST00000376377 1350 ntBASIC20.96■□□□□ 0.95
PGBD1Q96JS3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD1Q96JS3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD1Q96JS3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD1Q96JS3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.95■□□□□ 0.94
PGBD1Q96JS3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD1Q96JS3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD1Q96JS3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD1Q96JS3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD1Q96JS3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD1Q96JS3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.95■□□□□ 0.94
PGBD1Q96JS3 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.95■□□□□ 0.94
PGBD1Q96JS3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.95■□□□□ 0.94
PGBD1Q96JS3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PGBD1Q96JS3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms