Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF34Q969K3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF34Q969K3 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF34Q969K3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF34Q969K3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF34Q969K3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF34Q969K3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF34Q969K3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF34Q969K3 AC011498.5-201ENST00000592027 486 ntBASIC18.9■□□□□ 0.62
RNF34Q969K3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF34Q969K3 GPR32P1-201ENST00000601788 811 ntBASIC18.9■□□□□ 0.62
RNF34Q969K3 AP000550.4-202ENST00000639755 178 ntBASIC18.9■□□□□ 0.62
RNF34Q969K3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RNF34Q969K3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF34Q969K3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF34Q969K3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF34Q969K3 PHGDH-209ENST00000641074 1780 ntBASIC18.9■□□□□ 0.62
RNF34Q969K3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF34Q969K3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF34Q969K3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF34Q969K3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF34Q969K3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF34Q969K3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF34Q969K3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF34Q969K3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF34Q969K3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF34Q969K3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF34Q969K3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF34Q969K3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF34Q969K3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF34Q969K3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.89■□□□□ 0.62
RNF34Q969K3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
RNF34Q969K3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RNF34Q969K3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF34Q969K3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF34Q969K3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF34Q969K3 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.89■□□□□ 0.61
RNF34Q969K3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RNF34Q969K3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
RNF34Q969K3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF34Q969K3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF34Q969K3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.89■□□□□ 0.61
RNF34Q969K3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF34Q969K3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 RNF126P1-202ENST00000569893 925 ntBASIC18.89■□□□□ 0.61
RNF34Q969K3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
RNF34Q969K3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
RNF34Q969K3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF34Q969K3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF34Q969K3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF34Q969K3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RNF34Q969K3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF34Q969K3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF34Q969K3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF34Q969K3 LINC00602-201ENST00000629776 2065 ntBASIC18.88■□□□□ 0.61
RNF34Q969K3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF34Q969K3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF34Q969K3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RNF34Q969K3 IGHGP-201ENST00000390555 1178 ntBASIC18.88■□□□□ 0.61
RNF34Q969K3 TSPY22P-201ENST00000427496 604 ntBASIC18.88■□□□□ 0.61
RNF34Q969K3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF34Q969K3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF34Q969K3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF34Q969K3 AC004263.2-201ENST00000617183 678 ntBASIC18.88■□□□□ 0.61
RNF34Q969K3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF34Q969K3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF34Q969K3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF34Q969K3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF34Q969K3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
RNF34Q969K3 AC093677.2-201ENST00000600169 1863 ntBASIC18.88■□□□□ 0.61
RNF34Q969K3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF34Q969K3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF34Q969K3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF34Q969K3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF34Q969K3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF34Q969K3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
RNF34Q969K3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF34Q969K3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF34Q969K3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF34Q969K3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF34Q969K3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF34Q969K3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF34Q969K3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF34Q969K3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms