Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 AC096582.2-201ENST00000510860 516 ntBASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 AL591684.3-201ENST00000605187 298 ntBASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 AC132938.6-201ENST00000623828 1655 ntBASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 MTCL1P1-201ENST00000446207 792 ntBASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 MIR5100-201ENST00000579544 119 ntBASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 HLA-A-201ENST00000376802 1334 ntBASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A1Q93050 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP6V0A1Q93050 AC138932.1-201ENST00000534164 6830 ntBASIC20.14■□□□□ 0.82
ATP6V0A1Q93050 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
ATP6V0A1Q93050 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 AC090164.3-201ENST00000610780 2143 ntBASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP6V0A1Q93050 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms