Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATL1Q8WXF7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.65■□□□□ 0.42
ATL1Q8WXF7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.65■□□□□ 0.42
ATL1Q8WXF7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATL1Q8WXF7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATL1Q8WXF7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ATL1Q8WXF7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ATL1Q8WXF7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATL1Q8WXF7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATL1Q8WXF7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATL1Q8WXF7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATL1Q8WXF7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.65■□□□□ 0.42
ATL1Q8WXF7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATL1Q8WXF7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ATL1Q8WXF7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 SPDYE15P-201ENST00000424157 909 ntBASIC17.64■□□□□ 0.41
ATL1Q8WXF7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 AC092647.4-201ENST00000457211 535 ntBASIC17.64■□□□□ 0.41
ATL1Q8WXF7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATL1Q8WXF7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 DUTP2-201ENST00000519164 463 ntBASIC17.63■□□□□ 0.41
ATL1Q8WXF7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 LINC01238-205ENST00000567549 1107 ntBASIC17.63■□□□□ 0.41
ATL1Q8WXF7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 AC006011.2-201ENST00000621313 1158 ntBASIC17.63■□□□□ 0.41
ATL1Q8WXF7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.63■□□□□ 0.41
ATL1Q8WXF7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATL1Q8WXF7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms