Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 PKD1P1-201ENST00000458669 6805 ntBASIC18.52■□□□□ 0.56
SCG3Q8WXD2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 ABALON-201ENST00000629058 1903 ntBASIC18.52■□□□□ 0.56
SCG3Q8WXD2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
SCG3Q8WXD2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCG3Q8WXD2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.52■□□□□ 0.55
SCG3Q8WXD2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCG3Q8WXD2 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.52■□□□□ 0.55
SCG3Q8WXD2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
SCG3Q8WXD2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCG3Q8WXD2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 PCED1CP-201ENST00000419887 785 ntBASIC18.5■□□□□ 0.55
SCG3Q8WXD2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
SCG3Q8WXD2 HOXB1-202ENST00000577092 1414 ntBASIC18.49■□□□□ 0.55
SCG3Q8WXD2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 STARP1-201ENST00000397973 869 ntBASIC18.49■□□□□ 0.55
SCG3Q8WXD2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 AL499627.1-201ENST00000569373 2188 ntBASIC18.49■□□□□ 0.55
SCG3Q8WXD2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.49■□□□□ 0.55
SCG3Q8WXD2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SCG3Q8WXD2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms