Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01006Q8NI28 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LINC01006Q8NI28 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14□□□□□ -0.17
LINC01006Q8NI28 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01006Q8NI28 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14□□□□□ -0.17
LINC01006Q8NI28 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01006Q8NI28 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14□□□□□ -0.17
LINC01006Q8NI28 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14□□□□□ -0.17
LINC01006Q8NI28 KRT18P3-201ENST00000451602 1288 ntBASIC14□□□□□ -0.17
LINC01006Q8NI28 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14□□□□□ -0.17
LINC01006Q8NI28 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14□□□□□ -0.17
LINC01006Q8NI28 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14□□□□□ -0.17
LINC01006Q8NI28 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14□□□□□ -0.17
LINC01006Q8NI28 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14□□□□□ -0.17
LINC01006Q8NI28 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LINC01006Q8NI28 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01006Q8NI28 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14□□□□□ -0.17
LINC01006Q8NI28 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01006Q8NI28 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LINC01006Q8NI28 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01006Q8NI28 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14□□□□□ -0.17
LINC01006Q8NI28 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01006Q8NI28 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14□□□□□ -0.17
LINC01006Q8NI28 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14□□□□□ -0.17
LINC01006Q8NI28 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14□□□□□ -0.17
LINC01006Q8NI28 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01006Q8NI28 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01006Q8NI28 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01006Q8NI28 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14□□□□□ -0.17
LINC01006Q8NI28 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01006Q8NI28 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01006Q8NI28 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14□□□□□ -0.17
LINC01006Q8NI28 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01006Q8NI28 AP002414.3-201ENST00000589352 1468 ntBASIC13.99□□□□□ -0.17
LINC01006Q8NI28 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 ESPNP-201ENST00000270691 2015 ntBASIC13.99□□□□□ -0.17
LINC01006Q8NI28 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 LAGE3P1-201ENST00000425356 484 ntBASIC13.99□□□□□ -0.17
LINC01006Q8NI28 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 UNC93B6-202ENST00000528242 690 ntBASIC13.99□□□□□ -0.17
LINC01006Q8NI28 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01006Q8NI28 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 AC079776.2-201ENST00000641154 1609 ntBASIC13.98□□□□□ -0.17
LINC01006Q8NI28 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms