Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 AC009237.3-201ENST00000393279 1427 ntBASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 MTDHP2-201ENST00000601468 714 ntBASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 MIR7108-201ENST00000614319 87 ntBASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 AR-208ENST00000612452 10676 ntTSL 5 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SPTSSBQ8NFR3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms